Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01999 ATGCATGCCTTATGGGTCTCCTTGAAGGATAATGTCAAATGTGGAAACAAGCTCAACGATGTAATCAAGCAGCAAACAAAATGCGGCAAAGGAAGTGGCTATTCAGAAAAGGAGAAAATGAACGGATATAACAGACCTCTTACAGAAACTCCAACTGGCCTAATAGTTTCAAGACCAAGCAACTCACTGGTACGGCTTCATGAGCTGAGTGTTGGAGACCCATCAAGAAAAATTGTTGAGATGATCTTTCAGAAAGCTTGGTTGAACACCTCAAAGCCACTGAAGAGGGTTAGAACAGTTCTAAGGGTGAGGTACTCAGAAGAAGTCCATGAAAAGTTTGAAAAGTACAGAGAATATGTGAAGAAGGTGGCATCTGAGCAATATCCAAGGCATCCAAGGAGCACGGTAGATGGAAATGAACTGTTGCGGTTCTATGGTACTACAGTGAGATGTTTCCCAGGGAAATCTACTAAGAAAGTTCATGATATCTGTAAAGATCCATCTTGTTATCTTTGCCAAATAATTCAATTTAATTTCAACACGCGATGCGCCGAGATTCACTTGAATACAAGTGGCAAAGAGTTGAGTAATAGAACTGCCACTGCTAGAGTATATAATGTGAAAAAAGCTGCAATAATTTGCAGGATAATTGCTGGAACTGCAGTAAATGAAGTTGATGGTGAATATGAAGTGTCTCACTCAACTGGGTTAGGAGAAATGCAGTTTAGCTTAGAAAAATTTGTGATAAAAAATCCCAGTTCTATTCTTCCTTGTTTTGTAATCATTTTCAGCTAA 795 0.3912 MHALWVSLKDNVKCGNKLNDVIKQQTKCGKGSGYSEKEKMNGYNRPLTETPTGLIVSRPSNSLVRLHELSVGDPSRKIVEMIFQKAWLNTSKPLKRVRTVLRVRYSEEVHEKFEKYREYVKKVASEQYPRHPRSTVDGNELLRFYGTTVRCFPGKSTKKVHDICKDPSCYLCQIIQFNFNTRCAEIHLNTSGKELSNRTATARVYNVKKAAIICRIIAGTAVNEVDGEYEVSHSTGLGEMQFSLEKFVIKNPSSILPCFVIIFS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01999 264 SUPERFAMILY ADP-ribosylation 66 264 - -
Cca05g01999 264 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 264 - -
Cca05g01999 264 PANTHER NUCLEIC ACID-BINDING PROTEIN 2 264 - -
Cca05g01999 264 MobiDBLite consensus disorder prediction 29 49 - -
Cca05g01999 264 Gene3D - 63 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01999 Cca-Chr5 39881356 39885904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01999 68 262 C2H2 Transcription Factor Family AT5G54630 35.047 1.20e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01999 - - gsj:114384928 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01999 05 39881356 39885904 Cca05g01999 05 39881356 39885904 ECH