Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01962 ATGTCGGCGTCGGAGTCGGAGATTCTTCGGGAACTCGATTCACTGAAGGAGGCAAAGACCGCTATCGACAGCAAAATCTCTGCGCTTGAAGATCAACTCAAACAGATTCATCTCCGAAACGACGCCGCATCAAATGGttcttcttcttcttcttcttcttcACCGTACTCAACCAATGGATTGACGCAGGACATGATTCACAGATACAGTCGTCACCTCATGCTTCCTTCCTTTGGTGTTCAAGGGCAGGCAAATCTATTGAAGTCATCAATTTTAGTTGTGGGAGCTGGAGGATTAGGTGCTCCTGCATTGTTATACATTGCAGCTTCTGGTGTTGGGCGCTTGGGAATTGTTGATCATGATGTGGTTGAGCTCAATAATATGCATAGGCAGGTTATCCACACGGAAGCGTATGTTGGTAAGCCGAAAGTTGAATCTGCTGCTGCTGCCTGTCGCTCGATCAACTCCACTATTCAAGTTGTGGAACATCAAGAAGCTTTGCGGACTTCCAATGCTTTGGAAATTCTTAGCAAATATGATATAATAATAGATGCAACAGATAATGCTCCTACCCGATACATGATCAGTGATTGCTGTGTGGTTCTAGGAAAGCCTCTTGTATCAGGAGCTGCATTGGGATTGGAAGGGCAGCTCACTGTCTACAATTACAATGGTGGTCCTTGCTATCGATGCCTCTTTCCAATTCCACCACCTAGAACAGCTTGCCAAAGTTGTGCTGACGGTGGAGTTCTAGGAGTAGTTCCTGGTATAATTGGCTGTCTTCAAGCTCTTGAGGCAATTAAAATTGCAGCTTCTGTTGGTGAACCACTCTCGGGAAGGATGCTTCTCTTGGATGCATTGTCTGGACGGATTCGTATTGTCAAAATTAGAGGAAGGTCTATGCACTGTGAAGCTTGTGGAGAAAATGCAACATTTACCCAGCAGCAATTCCGAGAATTTGATTATGAGAAGTTCACTCAGACTCCGTTGTGTGTGGCTCCTGTGAAGTTAAATCTGCTTCCCAGTGAATCAAGAATCAGCAGCAAGGAGTACAGTGAAATAATTCTCAAGAAGGAACCACATGTGCTGGTTGATGTTAGACCAGCTCACCATTTCAAGATTGTATCTCTACCGAAGTCCCTGAACATTCCCCTGTCAACATTAGAGGCTAGGTTGCCTGAAGTATCATCAGCTTTGAAGAAAGAGGAAGAGGACAGCGGTGTGGTTTCTGGATCAAGTGCACAATTGTATGTAGTATGCAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAGTATCTTCACAAATTGGGTTTCACTTCTGCTAAGGATATCGTTGGGGGCATAGAATCATGGGCCCACAATGTGGATCCTAAGTTCCCTACATATTAG 1389 0.442 MSASESEILRELDSLKEAKTAIDSKISALEDQLKQIHLRNDAASNGSSSSSSSSPYSTNGLTQDMIHRYSRHLMLPSFGVQGQANLLKSSILVVGAGGLGAPALLYIAASGVGRLGIVDHDVVELNNMHRQVIHTEAYVGKPKVESAAAACRSINSTIQVVEHQEALRTSNALEILSKYDIIIDATDNAPTRYMISDCCVVLGKPLVSGAALGLEGQLTVYNYNGGPCYRCLFPIPPPRTACQSCADGGVLGVVPGIIGCLQALEAIKIAASVGEPLSGRMLLLDALSGRIRIVKIRGRSMHCEACGENATFTQQQFREFDYEKFTQTPLCVAPVKLNLLPSESRISSKEYSEIILKKEPHVLVDVRPAHHFKIVSLPKSLNIPLSTLEARLPEVSSALKKEEEDSGVVSGSSAQLYVVCRRGNDSQRAVQYLHKLGFTSAKDIVGGIESWAHNVDPKFPTY 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01962 462 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 4 448 IPR045886 -
Cca05g01962 462 CDD ThiF_MoeB_HesA_family 68 296 - -
Cca05g01962 462 Pfam ThiF family 69 304 IPR000594 -
Cca05g01962 462 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 29 462 IPR028885 GO:0002143|GO:0004792|GO:0005829
Cca05g01962 462 Pfam Rhodanese-like domain 349 452 IPR001763 -
Cca05g01962 462 PANTHER ADENYLYLTRANSFERASE AND SULFURTRANSFERASE MOCS3 4 448 - -
Cca05g01962 462 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 59 429 IPR035985 GO:0008641
Cca05g01962 462 Gene3D - 62 313 - -
Cca05g01962 462 Coils Coil 12 32 - -
Cca05g01962 462 SMART rhod_4 347 457 IPR001763 -
Cca05g01962 462 Coils Coil 385 405 - -
Cca05g01962 462 MobiDBLite consensus disorder prediction 41 61 - -
Cca05g01962 462 Gene3D - 344 462 IPR036873 -
Cca05g01962 462 ProSiteProfiles Rhodanese domain profile. 357 460 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01962 112 462 Sulfurtransferasese or Rhodanese AT5G55130 73.011 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01962 K11996 - gmx:100814736 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01962 05 39421474 39426351 Cca05g01962 05 39421474 39426351 ECH