Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01915 ATGAGTCTACTTCTCTTAAGTTTACTCTTGCTCATCCCAATCCTTCTTCTGCTAAGAAGAAAAAGAAAACCATCCAAAAGGGTCCCTCCAGGTTCACTTGGAATACCTATTATTGGTCAAAGCCTTGGCCTTCTTAGAGCCATGCGTGCCAACACAGCAGAAAAATGGGTTCAAGAAAGAATCAACAAGTATGGTCCCATTTCAAAGCTAAGCCTCTTTGGAAAACCAACAGTTTTGATCTATGGACAGGCTGCGAATAAGTTTATATTCTCCGGTGGTGGCAACACAATTGTTAACCAGCAAACACAGTCCGTCAAAATGATCCTTGGTGACCGGAACTTGCTGGAACTGTGTGGTGAAGATCACAGCCGAGTCAGAGGTGCACTTGTCTCATTCTTGAAACCAGAATCATTGAAGCAATATGTCGGGAAAATGGATGAAGAAGTTAGGAGGCACCTTGAGATGCATTGGCAGGGGGAACAGCAGATCAAGGTATTGCCCCTGATGAAGACTCTCACTTTCAACATAATTTGCTCTCTTCTGTTTGGTCTTGAGCGTGGAAAACAAAGAGATCAATTTCTGGATTCCTTCCAAGCCATGATAGAAGGAATGTGGTCCGTCCCAATTAATGTGCCATTCACACGCTACAACCGTAGCCTTAGAGCAAGTGCAAGAATCCAGAACTTGTTGAAGGAGATTGTGCACAAGAAGAAGACTGAACTCAAGCAAAATGGGGCATCTGCCGACCAAGACTTGATCAGTTGCTTGTTAGGCATGGTTGATGAAGATGGAAAACAAGTTATAACTGATATGGAAATCATTCACAATGTTTCGCTTGTCATGGTTGCTGGACATGACACCTCATCTGTTCTAATCACTTTCATCATCAGACTCTTAGCCAATGAACCTGCTATTTGTGCAGCAGTTCTTCAAgAACAGGAAGAGATAACAAAAAGCAAGCCCTCAGGAGAGGCGCTGACATGGGAAGACCTTTCAAAGATGAAGTACACCTGGAAAGTAGCAATGGAAACTCTTCGGATGTTTCCTCCTATTTTTGGTGGCTTCAGAAAAGCTGCAACAGATATTGAATATGATGGATACCTCATACCCAAAGGATGGCAGATCTTCTGGGTTACAGCAATGACCCACATGGACAAAAGTATTTTCCCTGAGCCATCAAAATTTGAACCCAGTAGATTTGAAAACCAAGCATCTGCCCCACCCTACTGCTTCATTCCATTTGGAGGTGGAACAAGAATATGTCCAGGGTATGAGTTTGCCAGGCTTGAAACTCTTGTTGCAATTCATTACCTTGTGACTCGGTTCAGCTGGAAGCTATGTTCGGACAATTTCTTCAGTAGGGATCCAATGCCAGTACCCACTCAAGGGCTACCAGTTCAAATTTGGCCAAGGAGACTCTCTTAA 1425 0.4344 MSLLLLSLLLLIPILLLLRRKRKPSKRVPPGSLGIPIIGQSLGLLRAMRANTAEKWVQERINKYGPISKLSLFGKPTVLIYGQAANKFIFSGGGNTIVNQQTQSVKMILGDRNLLELCGEDHSRVRGALVSFLKPESLKQYVGKMDEEVRRHLEMHWQGEQQIKVLPLMKTLTFNIICSLLFGLERGKQRDQFLDSFQAMIEGMWSVPINVPFTRYNRSLRASARIQNLLKEIVHKKKTELKQNGASADQDLISCLLGMVDEDGKQVITDMEIIHNVSLVMVAGHDTSSVLITFIIRLLANEPAICAAVLQEQEEITKSKPSGEALTWEDLSKMKYTWKVAMETLRMFPPIFGGFRKAATDIEYDGYLIPKGWQIFWVTAMTHMDKSIFPEPSKFEPSRFENQASAPPYCFIPFGGGTRICPGYEFARLETLVAIHYLVTRFSWKLCSDNFFSRDPMPVPTQGLPVQIWPRRLS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01915 474 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01915 474 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01915 474 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01915 474 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01915 474 Gene3D Cytochrome P450 18 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01915 474 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01915 474 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01915 474 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01915 474 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01915 474 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01915 474 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01915 474 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01915 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Cca05g01915 474 Pfam Cytochrome P450 29 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01915 474 PANTHER OS07G0520300 PROTEIN 12 470 - -
Cca05g01915 474 PANTHER CYTOCHROME P450 26 12 470 - -
Cca05g01915 474 SUPERFAMILY Cytochrome P450 22 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01915 Cca-Chr5 38988152 38993167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01915 28 375 Cytochrome P450 AT5G36110 35.795 1.25e-75 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01915 - - gmx:100790001 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01915 05 38988152 38993167 Cca05g01915 05 38988152 38993167 ECH