Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01907 ATGATTAGCACGGTGAAACAACCCGCCTCACCGATCACTACCAGAGGCTCTGGTGGTGTGTTTCTGCGGAAAAGGGGTTCACTTCTTCAGTCATGTTCCCTTGTTCCAGTGAAAACAAGGGAGAACAACGCTCTGCGATCTATGGTGCCAGTGCAGAAGCCACTGCACCTTGCATGCGTTGTTGGGTTGGGGAAATTTTCTGGGTCTGTGGTGAGGCGTGAGCGTGGTGATTTGGTGGCATGTGGGGCGTATGAGGCTGAGAGATCAGGGGTTGAAGGGGCTGGGGCTCCATCAGAGGCTGCTAAGAAGGTGAAAATTGGGATATACTTTGCAACCTGGTGGGCTCTTAATGTGGTGTTCAATATTTATAACAAGAAGGTGCTGAATGCATACCCTTACCCTTGGCTCACCTCAACCCTCTCCCTTGCATGTGGCTCTCTCATGATGTTGATCTCTTGGGCCACCAGGATTGCTGAGCCTCCTAAGACTGATCCTGAGTTCTGGAAGACTTTGTTCCCTGTTGCTGTTGCACATACAATAGGACATGTAGCGGCAACTGTTAGCATGTCAAAAGTTGCAGTATCATTCACCCATATTATTAAGAGCGGCGAGCCTGCTTTCAGTGTTCTGGTTTCCAGATTTATTCTGGGTGAGACCTTCCCAGTGCCGGTCTACCTGTCTTTACTTCCTATCATCGGTGGATGTGCACTTGCCGCTGTGACTGAGCTCAATTTCAATATGATTGGTTTTATGGGGGCTATGATATCAAACTTGGCATTTGTATTCCGCAATATCTTTTCTAAAAAGGGCATGAAGGGAAAGTCTGTTAGTGGAATGAATTACTATGCATGTTTATCTATGTTGTCCCTTCTTATTCTGACGCCGTTTGCGATAGCTGTGGAGGGACCACAGATGTGGGCAGCTGGATATCAAACAGCGCTCTCTCAAATTGGACCCCAATTTATATGGTGGGTGGCAGCTCAGAGCATATTTTATCATTTGTACAATCAGGTGTCATATATGTCTTTGGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATTTCTGTTATAGTTTCTTCAATCATTATCTTCCACACACCAGTTCAGCCTATTAATGCTCTAGGAGCTGCTATTGCCATCCTCGGAACCTTCTTGTATTCACAGGCAAAGCAGTAA 1194 0.4623 MISTVKQPASPITTRGSGGVFLRKRGSLLQSCSLVPVKTRENNALRSMVPVQKPLHLACVVGLGKFSGSVVRRERGDLVACGAYEAERSGVEGAGAPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPKTDPEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWAAGYQTALSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01907 397 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 35 396 - -
Cca05g01907 397 PANTHER SOLUTE CARRIER FAMILY 35 35 396 - -
Cca05g01907 397 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 105 396 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cca05g01907 397 Pfam Triose-phosphate Transporter family 105 393 IPR004853 -
Cca05g01907 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01907 Cca-Chr5 38907803 38913015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01907 1 396 Antiporters AT5G54800 75.186 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01907 K15283 - gmx:100776233 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01907 05 38907803 38913015 Cca09g01037 09 30922421 30925795 ECH
Cca05g01907 05 38907803 38913015 Cca05g01907 05 38907803 38913015 ECH
Cca09g01037 09 30922421 30925795 Cca05g01907 05 38907803 38913015 PCT