Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01889 ATGGAAGAAGAAGACACCCTGATACCCACATTTCTCAGAAAACCAGACCACAACTCCCCCCTCCCCTCCCACAAGTCCTTGCATGTTTTCCGGAGGAGCCGCAGGAGGTGGAGGGAGCAAGTGCCTGTGCTgaagaagaagagtaataagaaggaacatgaagatgaagatgaagacgaagatggagagaaagaagatggtgatgatgacagagaagagatagagatgaagaTTCATGCATTGCAGAGGATTGTGCCTGGTGGTGAGTCACTTGGAGTGGACAAGCTCTTTGATGAAACTGCTGGCTATATTCTGGCTTTGCAGTACCAAGTCAAAGCCTTGAGGGCTCTCACTGGCTTCTTTGACAAGTTGGACAAGGAGAAGAAGACCAAGTTTGGAGTTAGCCATTACTACCACAATAACTTAGGCTTATAA 435 0.377 MEEEDTLIPTFLRKPDHNSPLPSHKSLHVFRRSRRRWREQVPVLKKKSNKKEHEDEDEDEDGEKEDGDDDREEIEMKIHALQRIVPGGESLGVDKLFDETAGYILALQYQVKALRALTGFFDKLDKEKKTKFGVSHYYHNNLGL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01889 144 PANTHER TRANSCRIPTION FACTOR PAR1 26 129 - -
Cca05g01889 144 MobiDBLite consensus disorder prediction 55 70 - -
Cca05g01889 144 CDD bHLH_AtIBH1_like 72 118 IPR044549 GO:0006355
Cca05g01889 144 MobiDBLite consensus disorder prediction 1 26 - -
Cca05g01889 144 MobiDBLite consensus disorder prediction 40 73 - -
Cca05g01889 144 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 26 129 IPR044660 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01889 71 136 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 37.681 7.34e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01889 - - gmx:100817215 176.022