Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01883 ATGGTGTTTCCAGTGGTGCTCCTAAGGCTTGCAGAATGGATCTTGTACCAGTTGCTTGCCAACTCATGTTATAGAGCAGCAAGGAAAATGAAAAGTTATGGCTTTCATTTGGGGTATTTGTCATCTAAACCACCCCTTCGTCCTTCCCCTTTCCCTAGTGTCACCAAATGTGATTTGGAGGGTAGAGGCTCTCAAACACTTGCTTGTGACATCCATAGAGTCCTCTTGAGGTCTCACTCCTTCTTTCCTTACTTCATGCTTGTTGCCTTTGAAGGTGGCAGCATTTTGAGGGCACTCCTCTTGCTTTTGTCTTGTCCTGTGCTGTGGATTTTGGACCATGAGCTGAAGCTTAGGGTCATGACCTTCATCACCTTTTGTGGCCTAAGAACAAGTGTCATGGAAAGCATGTCAAGGGCTGTTTTGCCCAAGTTTTACTTGGAGAATCTCAACCTGCATGCTTATGAGGTTCTAGCTTCAGCAGGGTCCAAAGTTGTGTTCACAAGTGTGCCTAGAGTTATGGTGGAAGGGTTTCTTAAGGAGTATTTGAGTGTTGGGGCTGTTGTTGGCACAGAGTTGCACACTGTTGGTTCCTACTTCAGTGGTTTGCTTTCTGGCTCTGGCTTACTTGTGAAGCACAGAGCACTAAAGGATTATTTTGGAAATTCAAAGCCTGATGTTGGGGTTGGAAGCTCTTGTGTTCATGATCATCTTTTCCTCTCCCTTTGCAAGGAATCATATGTGGTGAACAATGAAGAGGGGAAGAGCAACACAAGCTCAGTGATGCCAAGGGACAAATATCCAAAGCCCTTAATATTTCATGATGGAAGACTAGCATCCCTGCCTACACCCTCAGCAACTCTCTATATGTTCATGTGGTTTCCATTTGCAATTCTTTTGGCCATTTATAGAATCCTTCTTGGTGTATTACTTCCTTATGGATTGGCAATGACCTTAGGTGTTTGGAGTGGCATAAATCTTCATGTGAAAGGCAGTGTCCCTGAAAAGTCAGATCCAAACAAAGGGGTCCTCTATGTGTGCTCCCACAGGACCCTCCTTGATCCTGTTTTTCTAAGCACGTGTTTGGCAAAGCCTTTGACTGCAGTCACATACAGCTTAAGCAAGGTGTCTGAGTTGATAGCCCCTATTAGGACTGTGAGGTTGACAAGGGACAGAAAGCAAGATGGTGAAACCATGCAAAGGCTTCTGAGTGAAGGTGATTTGGTGGTGTGTCCTGAAGGGACAACATGTAGAGAGCCATATTTATTGAGGTTCAGCTCACTTTTTGCAGAATTGGCTGATGAGATAGTGCCTGTGGCAATTAATACTCATGTGAGCATGTTCTATGGGACCACAGCAAGCGGTTTGAAATGCTTGGACCCTATTTTCTTTTTCATGAATCCAAGGCCTAGCTATTATATTGAGGTTCTTGGAAAGGTGCCAAAGGAACTCACATGTGGTGGTGGAGGAAGGTCAAGCTGTGAGGTGGCTAACTATATACAGAAACAGTTGGCTGATGCTTTGGGATTTGAGTGCACCAAACTCACAAGGAGGGATAAGTACATGATGCTAGCAGGGAATGAGGGGATTGTTCATGAAGACAAGTGGACAAAATGA 1614 0.4467 MVFPVVLLRLAEWILYQLLANSCYRAARKMKSYGFHLGYLSSKPPLRPSPFPSVTKCDLEGRGSQTLACDIHRVLLRSHSFFPYFMLVAFEGGSILRALLLLLSCPVLWILDHELKLRVMTFITFCGLRTSVMESMSRAVLPKFYLENLNLHAYEVLASAGSKVVFTSVPRVMVEGFLKEYLSVGAVVGTELHTVGSYFSGLLSGSGLLVKHRALKDYFGNSKPDVGVGSSCVHDHLFLSLCKESYVVNNEEGKSNTSSVMPRDKYPKPLIFHDGRLASLPTPSATLYMFMWFPFAILLAIYRILLGVLLPYGLAMTLGVWSGINLHVKGSVPEKSDPNKGVLYVCSHRTLLDPVFLSTCLAKPLTAVTYSLSKVSELIAPIRTVRLTRDRKQDGETMQRLLSEGDLVVCPEGTTCREPYLLRFSSLFAELADEIVPVAINTHVSMFYGTTASGLKCLDPIFFFMNPRPSYYIEVLGKVPKELTCGGGGRSSCEVANYIQKQLADALGFECTKLTRRDKYMMLAGNEGIVHEDKWTK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01883 537 CDD LPLAT 326 504 - -
Cca05g01883 537 Pfam Acyltransferase 333 435 IPR002123 GO:0016746
Cca05g01883 537 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1 19 533 - -
Cca05g01883 537 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 264 531 - -
Cca05g01883 537 SMART plsc_2 342 443 IPR002123 GO:0016746
Cca05g01883 537 PANTHER ANCIENT UBIQUITOUS PROTEIN 19 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01883 Cca-Chr5 38666686 38668914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01883 1 531 Acyl Lipid Metabolism Gene Families AT1G06520 57.797 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01883 K13508 - gmx:100803875 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01883 05 38666686 38668914 Cca09g00995 09 29889057 29891814 PCT