Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01823 ATGGTTTCGGGAGAAGGATTCATTGTGAGTGTGAGCAAGGTGGAGGTGGTGGCACCAGAGCTTCCAATGCAAGAGCACTGGCTCCCACTATCTAACCTTGATCTTCTCATTCCCCCACTCGACTTTAGTGTCTTCATTTGCTACAAAAATCCTTCGTCAATGTCCTTTCCTTCCATGGTAGGGTCCCTCAAAAATGCCTTGGCTCAGGCTCTAGTTTACTACTACCCTCTTGCGGGTGAAGTGGTGACCAACTCCACGGGTGAGCCTGAACTGTTTTGCAGTAACCGCGGTGTAGATTTTGTCGAAGCTGTGGCTGACGTGGAACTACACCGTCTCAACATGTACAACCCAGATGACACCATTGAAGGGAAGCTTGTGCCCAAAAAGAAGCATGGTGTCCTCGCTGTTCAGGCAACTGGTCTCAAGTGTGGGAGTTTAGTAGTGGCATGTGCTCTGGACCATCGCATAGGTGACGCCTATTCTGCGAACATGTTCCTCGTATCATGGGCCGAGATAGCCCAGCCCAACAAGCCCATAATCTCGGCCCATCCTTGTTTCCGACGGTCCCTTCTCTTCCCACGACGCCCACCTTCCATTGACCACCCTTCACTTCATGACATGTACGCTCCCATGGCTGCACTACCTCCTCCTAAGTTCGGAGTTCAATCTGAACCACTCATTAGTCGCATATACTACGTCACAAGCGACCACCTGAACCGCATGCAGGCGCTCGCTAGCTCAAACGGTGTGAAGCGCACAAGGCTCCAGTCTTTCTCCGCCTTCTTGTGGAAGACGGTtgctgaagctgctgctgctggtgttgatgGTCAGAGAAAGGTTGTTGCGAAGATGGGTGTTGTGGTTGATGGAAGGAAGAGACTGAGCAATGGCGACAAGAACATGGGTTCGTATTTCGGTAACGTGCTTTCAATCCCCTACGGTGGGAAACAGGTGGAGGAGCTTGTTGAAAAGCCGTTGAGTTGGGTGGCGGAGAAAGTTCACGAGTTTTTGGAGATGGGTGTGACAGAGGAGCATTTTTTGGGACTTGTTGATTGGGTGGAGGCACACCGACCTGTCCCTGGGGTTGCTAGGATCTATTGTGGCCATGAAAATGAAGAGGGACCTCGTTTTGTGGTTTCTTCTGGACAAAGGTTCCCTGTGTCAAAGGTTGACTTTGGGTGGGGGAAGCCTGTGTTTGCATCGTACCATTTTCCATGGGGTGGAGATGCTGGTTACGTCATGCCAATGCCTTCTCCTATTGGGAATGGTGATTGGTTAGTTTATATGCACCTTTTTGAGGGTCTTTTGAGTTTCATGGAGTCTAAGGATCCTCAGGTTTTTAAACCATTCTCTTGGGATTACGTCCTTAGTCGTCATTGA 1380 0.4906 MVSGEGFIVSVSKVEVVAPELPMQEHWLPLSNLDLLIPPLDFSVFICYKNPSSMSFPSMVGSLKNALAQALVYYYPLAGEVVTNSTGEPELFCSNRGVDFVEAVADVELHRLNMYNPDDTIEGKLVPKKKHGVLAVQATGLKCGSLVVACALDHRIGDAYSANMFLVSWAEIAQPNKPIISAHPCFRRSLLFPRRPPSIDHPSLHDMYAPMAALPPPKFGVQSEPLISRIYYVTSDHLNRMQALASSNGVKRTRLQSFSAFLWKTVAEAAAAGVDGQRKVVAKMGVVVDGRKRLSNGDKNMGSYFGNVLSIPYGGKQVEELVEKPLSWVAEKVHEFLEMGVTEEHFLGLVDWVEAHRPVPGVARIYCGHENEEGPRFVVSSGQRFPVSKVDFGWGKPVFASYHFPWGGDAGYVMPMPSPIGNGDWLVYMHLFEGLLSFMESKDPQVFKPFSWDYVLSRH 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01823 459 Gene3D - 8 210 IPR023213 -
Cca05g01823 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 451 - -
Cca05g01823 459 Gene3D - 212 441 IPR023213 -
Cca05g01823 459 Pfam Transferase family 9 442 - -
Cca05g01823 459 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01823 Cca-Chr5 37941937 37943449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01823 18 436 Monolignol Biosynthesis Gene Families AT5G48930 27.273 2.33e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01823 - - gmx:100809201 731.48