Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01814 ATGTCAATGTTGAGATCAGTTTGTCAGTTAAGAGTGGGAGTGACATCTCCAAAATCTTGCCTCTATCCCTCAATCTTCTCCTTTTCCCTTTCTCATTCCCAATCTCATTCTCACACTCCCACCTCTATTCCCAGAACCTTCCGTTTCCATCCACCTTCACTTCCTCTTTCACCCTTTATGTCCATCAAAGCAACAGCTTCTTATGGCACTGGGGGTGATGGTGCCGATAGTGCTAGGCCAAGGGAACTATTGGTGCAGCATTTGTTGGTCAAAGAAGATGACCAGAGGCTTCTGTTGGATCTTCAGCAAAGAATCTCTGCAGGTGAAGATTTGAGTGACCTTGCTGTGGAACATTCAATTTGCCCGTCCAAAGAAGATGGAGGAATGCTTGGGTGGGTCAGGAAGGGACAAATGGTTCCTGAGTTTGAAGAGGCTGCATTTAGTGCGCCTTTAAACAAAGTTGTAAAGTGCAAAACGAAATTCGGATGGCACTTGCTGCAGGTTTTATCTGAAAGGGAAGGGTCAATTCTTGAAGACATTCAACCTGATGAGCTGCATGCGAAAATTCAAGATCCCAACTTTTTGGAGGAGGCACAGTTAATTGATGTTCGAGAGCCTGAAGAAGTGGCCAAAGCATCTTTGCCAGGATTTACCGTTCTTCCCCTCCGCCAATTTGGAAGCTGGGGGCCTGAAATAACTACCAAATTTGACCCTCAAAAGGATACATATGTTTTGTGTCATCATGGCATGCGATCATTACAGGTTGCCAAGTGGTTGCAGTCACAGGGTTTTAGGAAAGTATACAATCTTTCTGGGGGAATCCATGCCTATGCTGTCCAGGTTGATCCATCAGTTCCCACATACTGA 867 0.4533 MSMLRSVCQLRVGVTSPKSCLYPSIFSFSLSHSQSHSHTPTSIPRTFRFHPPSLPLSPFMSIKATASYGTGGDGADSARPRELLVQHLLVKEDDQRLLLDLQQRISAGEDLSDLAVEHSICPSKEDGGMLGWVRKGQMVPEFEEAAFSAPLNKVVKCKTKFGWHLLQVLSEREGSILEDIQPDELHAKIQDPNFLEEAQLIDVREPEEVAKASLPGFTVLPLRQFGSWGPEITTKFDPQKDTYVLCHHGMRSLQVAKWLQSQGFRKVYNLSGGIHAYAVQVDPSVPTY 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01814 288 Gene3D - 174 285 IPR036873 -
Cca05g01814 288 Pfam PPIC-type PPIASE domain 92 170 - -
Cca05g01814 288 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 288 - -
Cca05g01814 288 Gene3D - 78 173 IPR046357 GO:0003755
Cca05g01814 288 ProSiteProfiles Rhodanese domain profile. 194 286 IPR001763 -
Cca05g01814 288 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 177 286 IPR036873 -
Cca05g01814 288 SMART rhod_4 180 283 IPR001763 -
Cca05g01814 288 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 80 170 IPR000297 GO:0003755
Cca05g01814 288 CDD RHOD_2 179 282 - -
Cca05g01814 288 Pfam Rhodanese-like domain 182 278 IPR001763 -
Cca05g01814 288 SUPERFAMILY FKBP-like 79 169 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01814 81 288 Sulfurtransferasese or Rhodanese AT5G19370 67.308 9.25e-105 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01814 - - gmx:100803404 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01814 05 37790855 37794870 Cca05g01814 05 37790855 37794870 ECH