Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01795 ATGTTGTTTGCTAACGGGAGTGAAGACATATTGAGCCTAACATCAGGAATGGGCTACACAATGTTCTTATTTCTAAATGCGGTGCAAATGGATTTCAGCATGATAACCAAAACGGGAAGGAAAGTTTGGGCAATCGCTCTTTCCTCCTTGACGATTCCAACGATAGTTGGTCTTAGCCTAAGTTACAAATTCATGGAGAACTTGCAAAAAACCTTTGGAGAGTTCAATGGAGAAAAATTCCCTGTGATAATAATGAACCACACTGGTTGTTCTTTTCCTGTGATAGCTTCTCTTCTCTCTGATCTTCAGATTTTGAACTCAGAACTTGGACGCTTAGCTCTCTCATCAGCCCTTGTTATGGATGTGATAAGCCAAATTATGACAGGTTTAGGCACTACTATTTCAAGCAGCCTTAGAACTGACTCTCATGATCATGAACTAGGCAAGGGACCTAAACTTGCCCTCTACAATGCCCTAAAATTCATTGGTTTTGTGTCAGTTTTGATTATTCTTGTACACCTCATAATGAGGTGGATTGTCAAGATCACACCCGAAGGTAGGCCTGTGAAGAAAGCATACACCTATCTAGTGATCCTCATGACCCTTGCTGCTGGCTTGTTTGGAGTATTTACAAACCAGACTGTGTTAGCTGGGATAGTACTCCTTGGTCTTCTTGTGCCAGAAGGTCCTCCCTTGGGGTCTGAATTAATTAAGCAGTTTGAATTGTTCAACACGTGGTTCCTTTTGCCTATCTTTGTCACATGTTGTGCAATGAAGGTTGATATTTCTGTGCACATTAGTGGCACCttgattctcgttgtggttgttgtagttgtggttgtGCATTTGCTTAAGATGCTCATAACCATTGGAGTTTGTCATTATTGCCACATACCCAAAATAGACGCTTTGTGTCTCGCTATGTTATTGAGCACCAAAGGTGTCGTGGACTTTTGCACACAAGTGTTTCTATTTGATTCCATGTTAATGAGCGTGGAAATAGTGTCCATGATGGCTATATCAGTTTTGGTGTTAGGAAGCATTGCACGCATTGGGGTGAAAGCCTTATACGACCCATCAAGGAAATACGCGGGATATCAAAAAAGGAACATACAAAACTTGAAACCCAATTCAGAGCTTCGGATGGTGGCATGCATCTGCAAACCAAGGCACATAATGCCCATCAAAAATGCCCTTGACATTTTCTACCCTACAACAAGCAACCCTTTGGCGGTTCACGTCTTGCACCTCATGGAGTTAATTGGCAGATCCTCTCCCATCTTCATCTCACACAATCTCCAAGAACGTGTTGGTTTGCATTACAACTTCTCTAAAGATGTCATTGTCACCTTCAACCTCTTCGAACATGACAATGCTGGAACCGCATCAGTTAGTACCTACACAGCCATATCTCCCCTACGCTTCATGCATGATGACATATGTTACCTTGCATTGGACAAACTCGCATGCATCATCCTTCTTCCATTTCACATTAGATGGAGTAAGGATGGTTCCGTCGAATCAACAGATGAGAATGTTAGGACTTTGAACTTGAAGGTTCTTGAAAGAGCACCATGCTCTGTGGGGATTCTTGTGAATCGACCAAGTTCTTCCAACGCTTGCATGAAGCAAATAGCCATGATTTTTTTGGGGGGTCCTGATGATAGGGAGGCATTGTGCTTGGCTAAGAGGACCATCAAAGATTGTGCGTATAACTTGGTTGTATACCACTTAGCTTCGACTGAGAGTGAGCTAAGTTGGGACAAGATGTTGGATGATGAGGTGCTGAAGAGTGTTAAGGGTTACCACGAGAAGATTGACAATGTGACTTATGAAAAGATAATCATTGAGGACCCTTCTAAGACTACTGCTTTTGTCTCTAAGATAGCAAATCAACATGATGTTTTCATAGTTGGGAGACGAAATGGGATCAAATCCTCTCAAACAGCAGCACTTGAGAATTGGACTGAGTTTTCTGAGTTGGGTGTAATTGGAGATTTGCTTGCTTCCCCGGATACCAATACTAATGCTTCAATTCTTGTTGTGCAACAACAAAAATTCCCAAGCCGTGGTTAA 2076 0.4147 MLFANGSEDILSLTSGMGYTMFLFLNAVQMDFSMITKTGRKVWAIALSSLTIPTIVGLSLSYKFMENLQKTFGEFNGEKFPVIIMNHTGCSFPVIASLLSDLQILNSELGRLALSSALVMDVISQIMTGLGTTISSSLRTDSHDHELGKGPKLALYNALKFIGFVSVLIILVHLIMRWIVKITPEGRPVKKAYTYLVILMTLAAGLFGVFTNQTVLAGIVLLGLLVPEGPPLGSELIKQFELFNTWFLLPIFVTCCAMKVDISVHISGTLILVVVVVVVVVHLLKMLITIGVCHYCHIPKIDALCLAMLLSTKGVVDFCTQVFLFDSMLMSVEIVSMMAISVLVLGSIARIGVKALYDPSRKYAGYQKRNIQNLKPNSELRMVACICKPRHIMPIKNALDIFYPTTSNPLAVHVLHLMELIGRSSPIFISHNLQERVGLHYNFSKDVIVTFNLFEHDNAGTASVSTYTAISPLRFMHDDICYLALDKLACIILLPFHIRWSKDGSVESTDENVRTLNLKVLERAPCSVGILVNRPSSSNACMKQIAMIFLGGPDDREALCLAKRTIKDCAYNLVVYHLASTESELSWDKMLDDEVLKSVKGYHEKIDNVTYEKIIIEDPSKTTAFVSKIANQHDVFIVGRRNGIKSSQTAALENWTEFSELGVIGDLLASPDTNTNASILVVQQQKFPSRG 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01795 691 Pfam Sodium/hydrogen exchanger family 8 349 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca05g01795 691 PANTHER CATION/H+ EXCHANGER 2 1 687 - -
Cca05g01795 691 PANTHER CATION/H + ANTIPORTER 1 687 - -
Cca05g01795 691 Gene3D - 2 364 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01795 Cca-Chr5 37623596 37626253 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01795 8 682 Antiporter Super Family AT3G44900 38.407 1.09e-153 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01795 - - gmx:106795756 1003.43