Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01793 ATGGGGATACATAAGGTCCTATCAAACACAAACGGAACACTTTTCTCTTCAATAGTGTTGGACGCGGTGAATTCAGACCCAGACAGAAGATATGTTAGCTATAATGTTACCATTCAAATGCCACCCAAGATAATATCTGATGGCATGTGGAGTAACTCAACCTCTGGCATATTACCTCACAGAGCCACAATGCCAATTTTGGAGCTCCAAATTATCACCATTTTCCTCATCACCCAATTCTTTCATACAATACTTAAACGTATGGGATTCCCTTATTTCGTTTCACAAATTATGGCTGGGTTTGTTCTTGGACCTTCTCTAAAGATAGCAGCATTGGCACCCGTAAAAGACCTATTGTTTCCTTACGGGAGTGAAGATGTGTTGAGCCTTATATCAGGAGTGGGATATGCAATGTTCCTGTTTCTAAATACAGTGCAAATGGACTTTAGCATGATAACTAGAACGGGCAGAAAAGCTTGGACAATCGCTCTTTCCTCCTTGTTGGTTCCGACATTAATTGGTGTCAGCCTATGCTATAAATTCATGGAGAGCTTGCAAAATGCCCTTGGAGAGTTCGATGGAGGAAAACTCCCTGTGATAGTAATATGCCATACTGGTTGTTCATTCCCTGTGATAGCTTTTCTTCTCTCTGATCTTGAGATTTTGAACTCAGAACTTGGACGCTTAGCACTCTCATCGGCCCTTGTTATGGATGTAACAAGCCAAGTTGTGACAGGTTTTGGCACTGCTATTATGAGCAGCCTTAAAACAGATTCTCATGATCATGAACTGGGCAAGGGACCTAAACTTGCCCTATACACTACCCTAAAATTCATTAGTTTTGTGTCTGTTGTGATTGTGGTTGCACGCCCCGCAATGAGGTGGATGGTGAGGATCACACCTGAAGGTAGGCCTGTGAAGAAATCATACACTTATGTGGTGATCCTTATGACCCTTGTTGCTAGCTTGTTAGGAGTATTTGCACGCCAAACTGTGTTAGCTGGTATATTGCTCATTGGTCTTCTTGTGCCAGAAGGTCCTCCCTTGGGATATGAATTAATTAAACAATTAGAGTTGTTCAACACATGGTTCCTTCTGCCTATCTTTGTCACTTGTTGTGCCATGAAGGTGGATATATCTGTGCACATTAATGGCACCTTGATCCTTATTGTGGGCACCATAATTGTGGTTGTGCATTTGCTTAAGATGCTCATAACCATTGGAATTTGTCGCCATTGTCAGATGCCTAAAACAGATGGTTTGTGTCTTGCACTCCTATTGAGTTGCAAAGGTGTCGTTGACTTTTGCAATGGAGTCTTTCTATTTGATTCGATGTTAATGAGCAAGGAAACCGTGTCCATGATGGCTATGTCAGTGTTGGTGTTGGGAAGCATTGCACGCATTGGGGTGAAAGCCTTATACGACCCATCAAGGAAATATGTGGGGTATCAAAAAAGGAACATACTCAACTTGAAACCCAACTCAGAGCTTCGGATGGTGGCATGCATCCACAAACCAAGCCACATATTGTCCATAAGAAATGCCCTTGACATATTTTGCCCCACAACAAGCAACCCTATGGTGGTTCACATCTTGCACCTCATGGAGCTAGTTGGCAGATCCTCACCCATCTTCATCTCACACCGTCTCCAAGAAAGTGTTGATTCAGATTACAACTACTCTCAAGATGTCATTGTCGCTTTCAACCTCTTTGAACATGATAAAGCTGGAACTACATCAGTTAGCACCTACACAGCCATATCTCCCTTACGCTTCATGCATGATGACATATGTTACCTTGCATTGGATAAGCTTGCCTGCATCATCCTTCTTCCGTTTCACGTGAGATGGAACGAGGGTGGTTCCATCGAATCAATGGATGACAACATTAGAACTTTGAACTCTAAAGTTTTGGAAAGAGCACCATGCTCTGTGGGGATTCTTGTGAATCGATCAAGTTCTTCCAACATTTGCATGAAGCAAATAGGCATGATTTTTTTGGGGGGTCCTGATGATAGAGAGGCATTATGCTTGGCTAAGAGGGCCATCAAAGATTGTGCGTATAACTTGTTTGTGTACCACTTAGCTTCAAGTCAGAGTGAGTCAAACTGGGACATGATGTTGGATGATGAGGTGCTGAAGAGTGTTAAGGGGTATTATGGGTATATTGAGAATGTGAATTATGAAAAGATCACTATTCATGACCCTTCTGAGACTACTACTTTTGTCTCTGAGATAGCGAATCAGCATGATTTTTTCATAGTTGGGAGACGAAATGGGATAAAATCATCTCAAACAGCAACACTTGAGAATTGGACTGAGTTTCCTGAGTTAGGTGTCATTGGAGATTTGCTTGCTTCCTCTGATACCAAAACTAATGCTTCCATTCTTGTTGTGCAACAACAACAAATGCGCAAGTTTTGA 2424 0.4208 MGIHKVLSNTNGTLFSSIVLDAVNSDPDRRYVSYNVTIQMPPKIISDGMWSNSTSGILPHRATMPILELQIITIFLITQFFHTILKRMGFPYFVSQIMAGFVLGPSLKIAALAPVKDLLFPYGSEDVLSLISGVGYAMFLFLNTVQMDFSMITRTGRKAWTIALSSLLVPTLIGVSLCYKFMESLQNALGEFDGGKLPVIVICHTGCSFPVIAFLLSDLEILNSELGRLALSSALVMDVTSQVVTGFGTAIMSSLKTDSHDHELGKGPKLALYTTLKFISFVSVVIVVARPAMRWMVRITPEGRPVKKSYTYVVILMTLVASLLGVFARQTVLAGILLIGLLVPEGPPLGYELIKQLELFNTWFLLPIFVTCCAMKVDISVHINGTLILIVGTIIVVVHLLKMLITIGICRHCQMPKTDGLCLALLLSCKGVVDFCNGVFLFDSMLMSKETVSMMAMSVLVLGSIARIGVKALYDPSRKYVGYQKRNILNLKPNSELRMVACIHKPSHILSIRNALDIFCPTTSNPMVVHILHLMELVGRSSPIFISHRLQESVDSDYNYSQDVIVAFNLFEHDKAGTTSVSTYTAISPLRFMHDDICYLALDKLACIILLPFHVRWNEGGSIESMDDNIRTLNSKVLERAPCSVGILVNRSSSSNICMKQIGMIFLGGPDDREALCLAKRAIKDCAYNLFVYHLASSQSESNWDMMLDDEVLKSVKGYYGYIENVNYEKITIHDPSETTTFVSEIANQHDFFIVGRRNGIKSSQTATLENWTEFPELGVIGDLLASSDTKTNASILVVQQQQMRKF 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01793 807 Pfam Sodium/hydrogen exchanger family 72 467 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca05g01793 807 PANTHER CATION/H + ANTIPORTER 19 805 - -
Cca05g01793 807 PANTHER CATION/H+ EXCHANGER 2 19 805 - -
Cca05g01793 807 Gene3D - 67 480 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01793 Cca-Chr5 37587484 37591148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01793 40 799 Antiporter Super Family AT3G44900 36.111 3.31e-158 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01793 - - gmx:106795756 1188.33