Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca05g01764 | ATGCAGGTTATCTGGTTGATGTTATTGTTGTTGGTGGCTATTGCATTGGGGAATTCAGACATTGATGCACTCCTTGAGTTGAAGAAGAGTATACAGAATGACCCTTCTGAATTAGTTGTTAATTCTTGGGATTCAAGGTCTTTAGATTCCGATGGATGTCCTCGGAACTGGTATGGGATATTGTGTAGTGAAGGTAGTGTTACATCAATCACTCTGGATAATGCTGGTTTGGTTGGTGAGTTTAATTTCCTTGCAATTAGTGGCCTTACAATGCTTAGCAATTTGTCAGTTGTGAACAACCAGTTCACAGGAGATCTCTTGCATATTGCTACAATGGAATCACTTGAATATCTTGATTTGTCCCTCAACAAGTTTAATGGGCCGTTACTCACTAACTTAGTTCAATTGCGCAAGTTAGCATATTTGAATCTTTCTTCAAATGAACTTGGAGGTACTCTTCCTATTGAGTTTCACAAACTTGAGCAGTTGAAGTATTTAGACTTGCACATGAACAACTTTTCTGGGGATATTATGCATATCTTTTCTCAGATGGGAAGTGTGATATATGTTGACTTGAGCAGCAATAGATTTTCTGGTACACTGGATTTGGGAATTGCAAATGACTCATTTCTCTCCTCAATCCAACATTTAAATGTTAGCCATAATTCCTTGAGTGGTGAGTTATTTGCTCATGATGGTATGCCATACCTTGACAATTTAGAGGTCTTGGATGCTAGTAGTAATCAGTTAGAGGGTAATATACCTTCCTTCACGTTTGTGGTATCTCTGCGGATTCTTCGACTTGCATCCAACCAGTTGACTGGTTTACTGCCAGAAGCTTTATTGAAGGAAAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTCCCATCGGAATTATTACTTCGGTGACTCTGAGGAAGCTTAATTTATCTTCAAACAAATTGTCTGGCCCCTTACCTCTCAGGGTAGGCCACTGTGCCATCATAGATTTGAGTAATAATACACTATCAGGTAATTTCTCAAGGATCCGGTATTGGGGTAACTATGTGGAAGTTGTTCAGCTAAGTATCAACTCATTGAGAGGAATGCTGCCAAATGAAACTTCTCAATTTTTAAGGTTAACTGCACTTAAGGTATCCAATAACTCATTGGATGGCTTTCTCCCACCAATCTTGGGAACATATCCAGAACTAAAAGAGATTGATCTTAGCCTCAACCAGCTTTCTGGGTTCCTACTACCAAGCTTTTTCACCTCAACCAAATTGATTAATCTTAACCTCTCCAACAATAAATTTTCTGGATCAATTCCTATTCAATTTCAGCCTCCAACTGATCCATTAGTTTCTGCTGAAAATTTTAGTCTGGTGTCTCTTGATCTTTCACACAATAACTTGAGTGGAATTCTTCCTTCAGATATGAGTAGGCTTCACAATTTGGCGTATCTCAATCTATGCAGCAACAAATTGGAAGGTACTATTCCTGATGACCTTCCAGATGAGTTGAGAGTGTTGAATGTGTCCTTTAATAATCTTTCTGGTGTTGTACCACAAAACTTAAAGCAGTTTCCTGAATCAGCATTTCATCCAGGAAATACTATGCTGATTTTTCCTAATTCACAATTTGCACCGAAAGATAGTTCCAACCTAGGTTTGAGGGAGCATTGGTTACATAAGAAATCTGCAGCTAGGATTTCCCTGATTGCATGTTTGGTTGCTGGTGCTTTTGTGATGGCTCTCGCAGGTATAATAATTTATTACAGGGTTCATCATAAAAAAGAAAGGACTTCTAAACAAAATGAAGCAAGAGGCATCCCCCAAGAGAGTACTATAGAGGCACCTTACAGAAATCTGGAAGCATTACAACCATCTCAAAGGGGGTCTGCTGATGATTCAAGGAACATTCATCCAATGGTACAGAAGCCAATAGATCTCGGCCATAGTGAATTAGTTAAGCATGAGGAAGGAACATCTTCCCCAATGTCTATTTTGTCGCCTTCAAATCCTTCATCTTCTAAAAGCCATCAGTTTGAAAATCCTGGTTCCCTCAGAGTATCCTCTCCTGATAAACTGATTGGAGACTTGCATATATTTGATGGATCCTTGGTGCTAACTGCTGAAGAACTTTCATGTGCTCCAGCAGAAGTTATTGGCAGGAGCTGTCATGGAACACTCTACAAAGCTACACTTGACTCTGGTCATGCATTGGCTGTCAAATGGTTAAGAGATGGAATAACTAAAGGAAAAAAAGAGTTGGCAAGGGAAATAAAGAAACTTGGGACTATCAAGCATCCAAACCTGGTTTCTATTCAGGGTTACTACCTGGGGCCAAAGGAACATGAGAAACTGATCATATCAAATTACATGAATGCACAATCTTTGGACATTTATCTCCATGAGGCAGAAAAAAGAAATCTGCATCCTTTGTACCTTGATGAAAGGCTCAGGGTGGCTATAGAGGTGGCTAGATGTCTGCATTACCTTCATGAAGAGAAAGCCATGCCTCATGGCAACCTCAAATCCACAAACATTTTGCTACAAACTCCCAACAGAAATGTCCTCCTAACTGACTACAGCCTGCACAGGATACTCACTGCTGCTGGTACAGCTGAGCAAGTTCTGAATGCCGGGGCACTCGGCTACCGGCCTCCTGAGTTCACCAAATCAAGCAAACCATGCCCTTCTTTGACAAGTGATGTCTATGCATTTGGAGTGGTCTTGTTGGAGCTCCTAACAGGAAGAAACTCTGGAGAAATAGTTTCTGGAATTCCAGGAGTGGTTGACCTCACAGACTGGGTGAGGTTCTTAGCTGAACAAGACCGTTCTAGCCACTGCTTTGATAGGTCTCTAGTGGACAAGCATAATGGAGAAAGAGCATCAAGAATTCTTGATGAGATGCTAAAGGTGGCTTTGAGATGCATCCTTCCAGCATCTGACAGGCCTGACATGAAAACTGTCTTTGATGATCTCACAACAATAATAAGGTAG | 3003 | 0.4056 | MQVIWLMLLLLVAIALGNSDIDALLELKKSIQNDPSELVVNSWDSRSLDSDGCPRNWYGILCSEGSVTSITLDNAGLVGEFNFLAISGLTMLSNLSVVNNQFTGDLLHIATMESLEYLDLSLNKFNGPLLTNLVQLRKLAYLNLSSNELGGTLPIEFHKLEQLKYLDLHMNNFSGDIMHIFSQMGSVIYVDLSSNRFSGTLDLGIANDSFLSSIQHLNVSHNSLSGELFAHDGMPYLDNLEVLDASSNQLEGNIPSFTFVVSLRILRLASNQLTGLLPEALLKESSMMLSELDLSQNKLEGPIGIITSVTLRKLNLSSNKLSGPLPLRVGHCAIIDLSNNTLSGNFSRIRYWGNYVEVVQLSINSLRGMLPNETSQFLRLTALKVSNNSLDGFLPPILGTYPELKEIDLSLNQLSGFLLPSFFTSTKLINLNLSNNKFSGSIPIQFQPPTDPLVSAENFSLVSLDLSHNNLSGILPSDMSRLHNLAYLNLCSNKLEGTIPDDLPDELRVLNVSFNNLSGVVPQNLKQFPESAFHPGNTMLIFPNSQFAPKDSSNLGLREHWLHKKSAARISLIACLVAGAFVMALAGIIIYYRVHHKKERTSKQNEARGIPQESTIEAPYRNLEALQPSQRGSADDSRNIHPMVQKPIDLGHSELVKHEEGTSSPMSILSPSNPSSSKSHQFENPGSLRVSSPDKLIGDLHIFDGSLVLTAEELSCAPAEVIGRSCHGTLYKATLDSGHALAVKWLRDGITKGKKELAREIKKLGTIKHPNLVSIQGYYLGPKEHEKLIISNYMNAQSLDIYLHEAEKRNLHPLYLDERLRVAIEVARCLHYLHEEKAMPHGNLKSTNILLQTPNRNVLLTDYSLHRILTAAGTAEQVLNAGALGYRPPEFTKSSKPCPSLTSDVYAFGVVLLELLTGRNSGEIVSGIPGVVDLTDWVRFLAEQDRSSHCFDRSLVDKHNGERASRILDEMLKVALRCILPASDRPDMKTVFDDLTTIIR | 1000 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca05g01764 | 1000 | SUPERFAMILY | L domain-like | 109 | 523 | - | - | |
Cca05g01764 | 1000 | Pfam | Leucine rich repeat N-terminal domain | 18 | 63 | IPR013210 | - | |
Cca05g01764 | 1000 | MobiDBLite | consensus disorder prediction | 600 | 621 | - | - | |
Cca05g01764 | 1000 | SUPERFAMILY | Protein kinase-like (PK-like) | 719 | 995 | IPR011009 | - | |
Cca05g01764 | 1000 | ProSiteProfiles | Protein kinase domain profile. | 716 | 999 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca05g01764 | 1000 | MobiDBLite | consensus disorder prediction | 657 | 690 | - | - | |
Cca05g01764 | 1000 | ProSiteProfiles | Leucine-rich repeat profile. | 460 | 481 | IPR001611 | GO:0005515 | |
Cca05g01764 | 1000 | Gene3D | Ribonuclease Inhibitor | 181 | 355 | IPR032675 | - | |
Cca05g01764 | 1000 | Gene3D | Phosphorylase Kinase; domain 1 | 722 | 794 | - | - | |
Cca05g01764 | 1000 | Gene3D | Transferase(Phosphotransferase) domain 1 | 795 | 1000 | - | - | |
Cca05g01764 | 1000 | PANTHER | OS07G0626500 PROTEIN | 1 | 998 | - | - | |
Cca05g01764 | 1000 | SMART | LRR_typ_2 | 482 | 506 | IPR003591 | - | |
Cca05g01764 | 1000 | SMART | LRR_typ_2 | 211 | 231 | IPR003591 | - | |
Cca05g01764 | 1000 | SMART | LRR_typ_2 | 136 | 159 | IPR003591 | - | |
Cca05g01764 | 1000 | SMART | LRR_typ_2 | 260 | 283 | IPR003591 | - | |
Cca05g01764 | 1000 | Gene3D | Ribonuclease Inhibitor | 356 | 456 | IPR032675 | - | |
Cca05g01764 | 1000 | Gene3D | Ribonuclease Inhibitor | 17 | 180 | IPR032675 | - | |
Cca05g01764 | 1000 | Gene3D | Ribonuclease Inhibitor | 457 | 546 | IPR032675 | - | |
Cca05g01764 | 1000 | MobiDBLite | consensus disorder prediction | 663 | 688 | - | - | |
Cca05g01764 | 1000 | PANTHER | LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN | 1 | 998 | - | - | |
Cca05g01764 | 1000 | Pfam | Protein tyrosine and serine/threonine kinase | 720 | 979 | IPR001245 | GO:0004672|GO:0006468 | |
Cca05g01764 | 1000 | Pfam | Leucine Rich repeat | 458 | 472 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca05g01764 | Cca-Chr5 | 37223421 | 37229780 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca05g01764 | 379 | 991 | Receptor kinase-like Gene Family | AT1G48480 | 32.643 | 5.56e-62 | 221 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Cca05g01764 | PK_Tyr_Ser-Thr | 1.5e-28 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca05g01764 | - | - | ccaj:109792420 | 1922.9 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca05g01764 | 05 | 37223421 | 37229780 | Cca05g01764 | 05 | 37223421 | 37229780 | ECH |