Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01710 ATGCTTGAAGAGGAAGAAGCATCAGAGATTGCACAAAACCCAAATGTAGTTTCTGTTTTTTTGAGCAAAGAGCACAAATTGTTCACTACGAGGTCATGGGATTTTCTTGGACTGGAAAAAAATGGAATAATTCCTGCAAACTCCGCTTGGAGGAAAGCAAGATTCGGAGCAAATACAATCATTGCCAATATCGATACGGACAAAGGAGAGGAAGAAGCCCCTGGGGTTAAGGAGGTGGAGGGTGCAAAGGGTGGAGAAGAAAATGAAGGAGACTAA 276 0.4275 MLEEEEASEIAQNPNVVSVFLSKEHKLFTTRSWDFLGLEKNGIIPANSAWRKARFGANTIIANIDTDKGEEEAPGVKEVEGAKGGEENEGD 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01710 91 MobiDBLite consensus disorder prediction 66 91 - -
Cca05g01710 91 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 67 IPR045051 -
Cca05g01710 91 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01710 Cca-Chr5 36700015 36704401 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01710 2 66 Subtilisin-like Serine Gene Family AT2G04160 63.077 5.16e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01710 - - gmx:100796255 120.553