Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01707 ATGGGTTCCAGCTCCATCTTGAAACTTTTTGTATCATCAATCCTTGTTTGCATTACGTTGCAGGCATATGCGCATGCATACACCCATGGTCTTAGAAAGACCTATATTGTATACTTGGGAGAACATTCTCATGGTCCAACTCCTTCCCTTGCTGATCTTCAGACAGCAACAAATTCCCACCATGATTTACTCGCTTCAGTCTTGGGCAGCCATGAGAAAGCAAAGGAAGCAGTTATGTACTCGTACAATAAGCACATCAATGGTTTTGCTGCAGTACTTGAAGAGGAAGAGGCGTCAGAGATTGCAAAAAAGCCAAATGTAATTTCTGTTTTCTTGAGCAAAGAGTATAAAATGCACACTACGAGGTCATGGGACTTTCTTGGGGTGGAAAAATATGGAGGAATTCCTGCAGAATCGGCTTGGTTGAAAGGAAATTTTGGCGAAAATACAATCATCGCCAATTTTGATTCAGGCGTTTGGCCCGAACACCCAAGTTTCAGCGACAATGGATACGGTCCTGTGCCATCAAAGTGGCGTGGAAACGGGGTCTGTCAGATTCACCATTTAGGAAACCAAACTTTCTGTAACAGGAAGTTGATTGGTGCAAGAGTCTTCAGCGAAGGTTACGAGTCACAATATGGGAAACTTGATCCGTTAAACCGCAGTGCACGTGACTTTGTTGGGCACGGTACGCATACCCTGTCAACTGCAGCTGGTAATTTTGCTCCTGGTGCAACTATTTTTGGCAATGGCAATGGCACTGCAAAGGGTGGATCCCCTAAAGCTCGTGTTGCTGCCTACAAAGTGTGTTGGTCTAAAAATGATGCTGGTGGCTGTCATGAAGCAGACATTCTACAAGCCTTTGATCATGCCATATATGATGGTGTTGATATCATCTCTGCCTCTGTGGGTGGCTCTAATCCTTACATTGAGGCTTTCTTCACTGATGGGGTTTCCATAGGGGCCTTCCATGCAGTTGCTAGAAATATAGTTGTAGTTTGCTCTGCTGGCAATGATGGACCAGCACCTAGATCTGTCACAAATGTTGCACCTTGGTCATTCACAGTTGCTGCTAGTACAATGGACAGGGATTTTTTCACCAACATTTCTCTCGGTAACAGACATTACCTAAAGGGTTCCAGTCTTAACAGAGGCTTACCATCACGGAAATTTTATCCATTGGTTCATGCTGTCAATGCTAGACTTCCTAATGCCACAATTCAAGACGCTGGTCTATGCAAGCCGGGAAAACTTGATCCATCCAAAATAAGGGGAAACATATTGATCTGCATTCGACTTGATGGAACAACATCAGTAGCTCAGGGTTACGAAGCTGCTAAAGCTGGCGCAGTGGGAATGTTTGTGGTCAATGATGAGAAAGGTGGCAACACACTTCTAGCTGAGCCTCTTCCTATACCAGCAGCGAGTTTAGATATCAACCAGGATGAGGATATTGATGAGCGTGAATGGTTTGGAAAAGGAGGTTCAGACAAAAACATTAGCAGGAAACTTGCTGCTTACATGACTGTTGCAAGAACATATTTAGGAATAAAGCCTGCTCCAATTATGGCTGGATTCTCATCCAGGGGTCCCAGTGCAGTACAACCATTGATACTCAAGCCTGACATAACTGCTCCTGGTGTGAACATATTGGCGGCTTATTCACTAGCCGCAAGTCCATCAAATCTACCATCAGATAGACGCCGTGTTCCTTTCAATATACAACAAGGAACTTCTATGTCATGCCCTCATGTTGCTGGTGTCGTAGGTCTTCTCAAAACACTTCACCCTGATTGGAGTCCAGCAGCTATAAAATCAGCCATTATGACTACTGCTACTACACTAGATAACAACAACCTACCGATTCGGGACGCATTTGATCAGATAGCAACTCCATTTGATTATGGCTCAGGACATATTAGGCCTAACCTTGCAATGGACCCTGGACTTGTTTATGATATGAGAACAAGGGATTACTTGAACTTCATATGTGCTCATGACCACAACCAATATTTACTCAAATACTTTAATCGAAGCTCTTACAATTGTCCAAAGTCTTACAACATTGAAAATCTGAATTACCCTTCGATCACGGTAGCAAATCGAGGGATGAACCCTATAAATGTTACTCGTACAGTTACCAATGTGGGGACTCCAACAAGCACATATGTTGTGAGAGCTAACGTAAGTGATGGATTTGAGGTTGTTGTTCGACCAAGTTCATTGACTTTTAAGACAATTGGAGAAAAGAAGAGCTTTCGGGTTATTCTTCTGGCAACTAGTGTGCCTAGTCATGGTTTTCCAGTATTTGGGAACTTGTCTTGGACAGATGGCAATCACACAGTTACCAGTCCTATTGTAGTCCTGTAA 2370 0.4342 MGSSSILKLFVSSILVCITLQAYAHAYTHGLRKTYIVYLGEHSHGPTPSLADLQTATNSHHDLLASVLGSHEKAKEAVMYSYNKHINGFAAVLEEEEASEIAKKPNVISVFLSKEYKMHTTRSWDFLGVEKYGGIPAESAWLKGNFGENTIIANFDSGVWPEHPSFSDNGYGPVPSKWRGNGVCQIHHLGNQTFCNRKLIGARVFSEGYESQYGKLDPLNRSARDFVGHGTHTLSTAAGNFAPGATIFGNGNGTAKGGSPKARVAAYKVCWSKNDAGGCHEADILQAFDHAIYDGVDIISASVGGSNPYIEAFFTDGVSIGAFHAVARNIVVVCSAGNDGPAPRSVTNVAPWSFTVAASTMDRDFFTNISLGNRHYLKGSSLNRGLPSRKFYPLVHAVNARLPNATIQDAGLCKPGKLDPSKIRGNILICIRLDGTTSVAQGYEAAKAGAVGMFVVNDEKGGNTLLAEPLPIPAASLDINQDEDIDEREWFGKGGSDKNISRKLAAYMTVARTYLGIKPAPIMAGFSSRGPSAVQPLILKPDITAPGVNILAAYSLAASPSNLPSDRRRVPFNIQQGTSMSCPHVAGVVGLLKTLHPDWSPAAIKSAIMTTATTLDNNNLPIRDAFDQIATPFDYGSGHIRPNLAMDPGLVYDMRTRDYLNFICAHDHNQYLLKYFNRSSYNCPKSYNIENLNYPSITVANRGMNPINVTRTVTNVGTPTSTYVVRANVSDGFEVVVRPSSLTFKTIGEKKSFRVILLATSVPSHGFPVFGNLSWTDGNHTVTSPIVVL 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01707 789 Pfam Subtilase family 147 618 IPR000209 GO:0006508|GO:0008236
Cca05g01707 789 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Cca05g01707 789 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Cca05g01707 789 PRINTS Subtilisin serine protease family (S8) signature 576 592 IPR015500 -
Cca05g01707 789 SUPERFAMILY Subtilisin-like 118 650 IPR036852 GO:0004252|GO:0006508
Cca05g01707 789 CDD PA_subtilisin_like 368 478 - -
Cca05g01707 789 Gene3D - 663 789 - -
Cca05g01707 789 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 789 IPR045051 -
Cca05g01707 789 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 119 IPR037045 -
Cca05g01707 789 Gene3D - 362 515 - -
Cca05g01707 789 Gene3D Peptidase S8/S53 domain 150 659 IPR036852 GO:0004252|GO:0006508
Cca05g01707 789 ProSiteProfiles Serine proteases, subtilase domain profile. 123 646 - -
Cca05g01707 789 CDD Peptidases_S8_3 116 613 IPR034197 -
Cca05g01707 789 Pfam Peptidase inhibitor I9 34 119 IPR010259 -
Cca05g01707 789 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 23 789 - -
Cca05g01707 789 ProSitePatterns Serine proteases, subtilase family, serine active site. 577 587 IPR023828 -
Cca05g01707 789 Pfam Fibronectin type-III domain 691 788 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01707 Cca-Chr5 36643526 36651056 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01707 34 788 Subtilisin-like Serine Gene Family AT2G04160 51.779 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01707 - - gmx:100794135 1408.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01707 05 36643526 36651056 Cca05g01707 05 36643526 36651056 ECH