Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01703 ATGGGAGGACATTCCCATGGTCCAGACCCTTCGCCGAGTGATCTTGAAACAGCCACAAATTCTCATCATGATTTATTGGCTTCTGTCCTAGGAAGTCACGAGATGGCGAAGGAAGCAATTATGTACTCCTACAATAAGCACATCAATGGTTTTGCTGCCATGCTTGAAGAGGAAGAAGCATCAGAGATTGCACAAAACCCAAATGTAGTTTCTGTTTTTTTGAGCAAAGAGCACAAATTGTTCACTACGAGGTCATGGGATTTTCTTGGACTGGAAAAAAATGGAATAATTCCTGCAAACTCCGCTTGGAGGAAAGCAAGATTCGGAGCAAATACAATCATTGCCAATATCGATACGGGCGTTTGGCCGGAGCACCCGAGTTTCAGCGACAAAGGGTATGGGCCAATCCCATCAAAGTGGCGAGGGAAAGGCGTGTGTGAGATAGACGGTTATAATGGTACAAATACAAACAAATACTTGTGTAACAGGAAGCTGATAGGAGCAAGAGTGTTCTACAAAAACTACGAGGTGCAAGTGGAGAAGGTGGAGAGAGGGCAACGGAGCGCACGTGACTACATAGGGCATGGTAGCCACACACTGTCAACTGCGGGGGGTAATTTTGTGCGTGGTGCGCACGTGGAAGGTAACGGAAGAGGCACCGCTAAGGGAGGCTCCCCGAGAGCTCGCGTCGTGGCCTACAAAGCATGCTGGCAAAAATTCGATGCAGGAGGTTGCCAAGATGCAGACTTGCTGCAAGCATTTGATCACGCCATTCACGACGGCGTTGACATCATCTCCGTCTCTCTGGGTTCTGCTCAGCCCTATCCCGAAGCTTTGTTCACCAACGGGGTTTCCATCGGCTCATTCCATGCCGTTGCCCGTAACATTCTCGTTGTATGCTCTGCCGGAAACCAAGGCCCTGCATCCATGAGTGTCACCAATGTCGCACCCTGGGCCTTCACCGTTGCTGCCAGCACCATGGATAGAGATTTTCTCTCCAACATTTCTTTTTCCAACAATCAATCCATTGCGGGTGCCAGTGTTAATCGAGGCTTGCTGCCATTCTCCCCATCCAACAAGTTCTATGCCACCATTAATTCTGTCACCGCTAAGCTACCTCATGCGTCCGATGATGATGCTCGCTTATGCAAACCGGGAACACTTGATCCTAAAAAAGTAAAGGGTAAACTACTGGTCTGCCTTCGAGGTGATAAATTAAGTTCAGCTAAGGAGACCGCAGAAGGGAAACGTGCGGGCGCCGTGTCAGTTTTGGTGGCAAATGATAAGGACAGTGGACATTTAATTCTGCCCCAGGATAATATCATACATTCTGTAAGTATCACGGGTACCAAAAGTAAGCATGGCGACACGAGTACAAGCAACCCTAATAGCAAGACTCATAGCATTGATTTAACCAAGGAAATGTTCGCTTACGTGGGTGATGCGAAAACATATATAGGAGTAAAGCCAGCTCCAATCATTGCTGGATTCTCATCCAGGGGTCCCAGTGCCGTGCAACCATTGATACTAAAGCCTGACATAACTGCTCCTGGTGTGAGCGTAATTGCTGCTTTTTCACAAGCCGCGGGTCCGTCTAATCTTGAATCAGATACACGTCGGGTTCTATTCAATTTGCAGCAGGGAACTTCCATGTCTTGCCCTCATGTCGCTGGCATTGCGGCTCTTGTCAAAACATATCATCCTGATTGGACTCCTGCAGCTATCAAATCTGCTATTATGACTACAGCTACAATACTAGATAACACGAATCGACGCATTCGGAACGCATTTGATAAGGAGGCAACTCCATTCGAATACGGCGCCGGACACGTTCGGCCTGACCTTGCTATGCACCCTGGACTCGTTTATGATTTAAACACAAAGGATTACTTGAACTTCTTATGTGCTTCAAATTACGACCAAGATTTACTCAAGTATTTTTCAAGTTCGAATGTCCCCTACACTTGTCCAAAGTCTTACAGAATTCAAGATTTCAACTATCCTTCAATTACCGTGCATCATCCTGGGTCAAGGCCTGTAGTTGTTACTCGTACTGTTACCAACGTTGGGCCTCCAAGCACATATGTTGTGAATACTCACTGGCCAAAGGGGATCAAGGTTTTTGTTCAACCAAGTTCGCTGACTTTTAAGAAAACTGGAGAAAAGAAAAAGTTTCAGGTTATTCTAAAGCCAATGGGTGTGGCCGCTGGGCATCCTTTATTTGGGAATTTGTCTTGGACAGATGGCAATCACACAGTAACCAGTCCTATCGTCGTGCTGGACCAGGAAACTTAG 2295 0.4684 MGGHSHGPDPSPSDLETATNSHHDLLASVLGSHEMAKEAIMYSYNKHINGFAAMLEEEEASEIAQNPNVVSVFLSKEHKLFTTRSWDFLGLEKNGIIPANSAWRKARFGANTIIANIDTGVWPEHPSFSDKGYGPIPSKWRGKGVCEIDGYNGTNTNKYLCNRKLIGARVFYKNYEVQVEKVERGQRSARDYIGHGSHTLSTAGGNFVRGAHVEGNGRGTAKGGSPRARVVAYKACWQKFDAGGCQDADLLQAFDHAIHDGVDIISVSLGSAQPYPEALFTNGVSIGSFHAVARNILVVCSAGNQGPASMSVTNVAPWAFTVAASTMDRDFLSNISFSNNQSIAGASVNRGLLPFSPSNKFYATINSVTAKLPHASDDDARLCKPGTLDPKKVKGKLLVCLRGDKLSSAKETAEGKRAGAVSVLVANDKDSGHLILPQDNIIHSVSITGTKSKHGDTSTSNPNSKTHSIDLTKEMFAYVGDAKTYIGVKPAPIIAGFSSRGPSAVQPLILKPDITAPGVSVIAAFSQAAGPSNLESDTRRVLFNLQQGTSMSCPHVAGIAALVKTYHPDWTPAAIKSAIMTTATILDNTNRRIRNAFDKEATPFEYGAGHVRPDLAMHPGLVYDLNTKDYLNFLCASNYDQDLLKYFSSSNVPYTCPKSYRIQDFNYPSITVHHPGSRPVVVTRTVTNVGPPSTYVVNTHWPKGIKVFVQPSSLTFKKTGEKKKFQVILKPMGVAAGHPLFGNLSWTDGNHTVTSPIVVLDQET 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01703 764 Gene3D - 328 486 - -
Cca05g01703 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 81 IPR037045 -
Cca05g01703 764 ProSiteProfiles Serine proteases, subtilase domain profile. 85 617 - -
Cca05g01703 764 Pfam Fibronectin type-III domain 664 759 IPR041469 -
Cca05g01703 764 Pfam Subtilase family 110 594 IPR000209 GO:0006508|GO:0008236
Cca05g01703 764 Pfam Peptidase inhibitor I9 16 79 IPR010259 -
Cca05g01703 764 Gene3D Peptidase S8/S53 domain 112 630 IPR036852 GO:0004252|GO:0006508
Cca05g01703 764 PRINTS Subtilisin serine protease family (S8) signature 109 128 IPR015500 -
Cca05g01703 764 PRINTS Subtilisin serine protease family (S8) signature 191 204 IPR015500 -
Cca05g01703 764 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Cca05g01703 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Cca05g01703 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 760 IPR045051 -
Cca05g01703 764 SUPERFAMILY Subtilisin-like 80 621 IPR036852 GO:0004252|GO:0006508
Cca05g01703 764 CDD PA_subtilisin_like 334 462 - -
Cca05g01703 764 Gene3D - 634 761 - -
Cca05g01703 764 CDD Peptidases_S8_3 78 584 IPR034197 -
Cca05g01703 764 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 5 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01703 Cca-Chr5 36572766 36578389 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01703 1 759 Subtilisin-like Serine Gene Family AT2G04160 51.444 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01703 - - gmx:100795195 1169.07