Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01687 ATGGTTTTGTACACACAAATGATTTGCCAGCTGAATTTAAACGCCTCTTTTGTCTCCCACCGCGCCACACTTCCAAAACCCCTCTCACATCCATCTCCCCTTTCTCTCAAAGTTCGGTGCTTTCGCGCCCCTTCTCCTCCCAGTCCCCTTCTCTCGCCACCTCCACCCAAACGACTCTCTCGCCTCGCCAGAACTCAAATTCAGCACGTACTAATCGATTACCTCCACTCCACGCGCGGCCACACCTTCACCGACGCCGAATACATCGCCACCAACTCCCCGCGCTTCCTCCAATCACTGCTCTCGATGATCGACGACAAAGACGACGACGTTTCCCGTTCGCTGCGAAAGTTCCTCAGGTATAACCCCATTAACGAGTTTGAACCCTTTTTCGAGAGTTTGGGAATCGACCCTTCCGAGTTGCATTCGGTTCTCCCACGTGGAGTGTTTTTCTTGGCTGATGATTTTGTCTTACTTGATAACTTTCATGTTTTGTGTAATTATGGGCTCCCCAGGAATAGGATGGGGAAGCTTTATACGGATGCAAAAGAGATTTTTGGGTATGCTAGTGGGTTGTTGGCTTTAAAGTTAGGAGCTTATGAGAGTTTGGGTTTGAGTAGGTCAACTGTTGCCAAGCTTGTTGTTTGTTGCCCTTTTCTTTTGGTTGGTGATGTTAATTCTGAGTTTGTTGCTGTGCTTGATTGGTTGAGAAGCATTGGGATTGAAAGTGATTGGATGGTGAGTTATTTGTCTTGTTCAAGGGCGTATAGTTGGAAAAAGATGCTTGATACCATGCAGTTTCTGAATAAAGTGGGCTATTCTGAGGAACAAATGCGCAACTTGTTTAGGGGGAATCCGAAATTGTTGTTGGAAGGTTTTGGGAGGAAGCTGTACTTGTTTTTCGGTAGGTTGCTTAAGGATCATAAAGGATGA 933 0.4641 MVLYTQMICQLNLNASFVSHRATLPKPLSHPSPLSLKVRCFRAPSPPSPLLSPPPPKRLSRLARTQIQHVLIDYLHSTRGHTFTDAEYIATNSPRFLQSLLSMIDDKDDDVSRSLRKFLRYNPINEFEPFFESLGIDPSELHSVLPRGVFFLADDFVLLDNFHVLCNYGLPRNRMGKLYTDAKEIFGYASGLLALKLGAYESLGLSRSTVAKLVVCCPFLLVGDVNSEFVAVLDWLRSIGIESDWMVSYLSCSRAYSWKKMLDTMQFLNKVGYSEEQMRNLFRGNPKLLLEGFGRKLYLFFGRLLKDHKG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01687 310 Gene3D Transcription termination factor 3, mitochondrial 158 297 IPR038538 -
Cca05g01687 310 PANTHER CGI-12 PROTEIN-RELATED 37 306 IPR003690 GO:0003690|GO:0006355
Cca05g01687 310 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 37 306 - -
Cca05g01687 310 Pfam mTERF 161 289 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01687 Cca-Chr5 36286753 36287921 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Cca05g01687 mTERF 1.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01687 - - gmx:100803162 434.876