Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01681 ATGAGTCGTCTCACATGGCTATTATTGTTGACCCTAAATCTGGTGGCAACTTCGGAGGCAAGGAATAATATCCCTGCCGTTATAGTGTTCGGAGACTCCTCTGTGGATTCTGGGAACAACAACGTCATAGCCACTGTTCTGAAGAGCAACTTCAAGCCTTATGGACGAGACTTCGAAGGTGGTCGTCCCACGGGACGGTTCTGCAATGGTCGTAATGTGATACCACTGTGGAAGGAGCTAGAGTTCTACAAGGAGTTTCAAGCCAAATTGAGAGCACATGTTGGTGTAGAAAAAGCCAACTATATCATCGGAGAAGCGTTGTACTTGATGAGCCTAGGAACCAACGATTTCCTCGAAAACTATTACGTGTTCCCAACCCGACGACTCCATTATACCGTGTCACAATACGAGGATTTTTTGTTGGATATTGCGGATAATTTCATTCGGAAATTGTACGCACTTGGGGTACGAAAATTAGCCATAACGGGTCTTGTTCCCGTAGGGTGTCTCCCCTTAGAGAGGGCCACGAACGTTTTAGGGCACCATGGTTGCAACCAGGAATACAACAACGTGGCTTTGAGCTTCAATAAGAAGTTGGATAATGTGATATCCAAGCTTAATAGGGGGCTCCCAGGGTTCATGGCTATGTCGGCAAATGCCTATTCCATTGTCAATGACATCATTACACGACCTTCCGCATATGGATATGAGGTTGTGGAGAAGGCATGCTGTTCCACAGGAACATTTGAGATGAGCTATTTGTGCAGTGATAAGAATCCACTTACATGCACAGACGCCAACAAGTACGTGTTTTGGGATGCCTTTCATCCTACAGAGAAGACAAATCGCATTGTCTCAGACTATTTGATACCCAAGGTTCTAGCAACCTTTAGATGA 897 0.4537 MSRLTWLLLLTLNLVATSEARNNIPAVIVFGDSSVDSGNNNVIATVLKSNFKPYGRDFEGGRPTGRFCNGRNVIPLWKELEFYKEFQAKLRAHVGVEKANYIIGEALYLMSLGTNDFLENYYVFPTRRLHYTVSQYEDFLLDIADNFIRKLYALGVRKLAITGLVPVGCLPLERATNVLGHHGCNQEYNNVALSFNKKLDNVISKLNRGLPGFMAMSANAYSIVNDIITRPSAYGYEVVEKACCSTGTFEMSYLCSDKNPLTCTDANKYVFWDAFHPTEKTNRIVSDYLIPKVLATFR 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01681 298 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 72 297 - -
Cca05g01681 298 PANTHER GDSL ESTERASE/LIPASE EXL3 72 297 - -
Cca05g01681 298 SUPERFAMILY SGNH hydrolase 25 294 - -
Cca05g01681 298 Pfam GDSL-like Lipase/Acylhydrolase 27 289 IPR001087 GO:0016788
Cca05g01681 298 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 71 - -
Cca05g01681 298 CDD SGNH_plant_lipase_like 25 292 IPR035669 -
Cca05g01681 298 Gene3D SGNH hydrolase 14 295 IPR036514 -
Cca05g01681 298 PANTHER GDSL ESTERASE/LIPASE EXL3 6 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01681 Cca-Chr5 36258080 36264070 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01681 2 293 Pollen Coat Proteome AT1G75910 29.023 4.81e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01681 - - ccaj:109810357 582.022