Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01678 ATGGGTTTCACTGGGGAGTTGGTAAGAAGTGTCTTCTCCAAAAATCGTTCTGATGGGTCGCATGAAAGCAAAGTGAGGCGCAATAGTGCTGAGAATAGAAGATGGTTATCTGTTAGGTCATACTTGTGTGGAGATGAATTCAATTCAGTCCTTGCAGAGAAAGATATAGATTCAGTTAAGAGCTTTGAGGTAACTGTTTCACAGTCCGTACAGGAGGACTTGAATGATAAAGGAGACACTGAGAGTGAAGAAACTGTGGAGAATGTAACACAGAAAAGGCCAAATTCAAACTCCAAACAATTGAATGAGGAAGAAGCAGCCATTCTTATTCAATCAGCATACAGAGGCTTCCTGTTGAGGCGTCAAAATGGAGAAATAACATCAAAATCTGGAAAAGATGAGTTCAATTTAGTAACAGAAAGTCCAGACAGAAAGTCCATGGGCACATCTATTGAAGTCCAAACCGCGAACTCCATAGAAGTTTTTTCGGTTGAAGGAGAACAAAAAGGCATTTGCCAACGCGTTCAGCGCAGGACCAGAACTCAAGTAATAAAGCAAAAGGAAGACTGGGATGACAGCACTGTAAGTAGCTATGTTTCGAAAATGAGGATGCAGAATAGAATGGAAGCATCAACCAGGAGGGAAAGAACACTGGCTTATGCTTTCTCACAACAGCTAAGAATCTGTTCAAAGAGAAGATCTCCAAAATTTAACAGCATGGAAGCAAATATGAGTTGGAGTTGGCTTGAACGGTGGATGGCAACACGCCTTCCAGAGACCTCATCAGTTGAAAGCCATGCCATGAAGCAATATGACCCTCCTAACAATAACAATAAATTCACAATCATGACAAGATTTTTAGATGCTGCTGCTGGGGAGGAAAAGGAGAGTTGCGGGTCAAACGAAGTGCCCCTTCATTTTGACAACTATTCAATCAATTCACCAGAAGAAAAAATTAGCTTCAAACCACATACTGCAAAGACCAATTTCAAACCAAGGAGAACAGTTTCAAAAAGGAAAACAGTGCCAAGTTATCAGTTCCATGAAGAGCAGCCAAAGGAAAGCAAGAGAGATGGTTCGGGCAATGCTTGCAAGGATATTAAGCCAAAGCAAAAGCAAGTAGGAAGCAGGACATAA 1137 0.4134 MGFTGELVRSVFSKNRSDGSHESKVRRNSAENRRWLSVRSYLCGDEFNSVLAEKDIDSVKSFEVTVSQSVQEDLNDKGDTESEETVENVTQKRPNSNSKQLNEEEAAILIQSAYRGFLLRRQNGEITSKSGKDEFNLVTESPDRKSMGTSIEVQTANSIEVFSVEGEQKGICQRVQRRTRTQVIKQKEDWDDSTVSSYVSKMRMQNRMEASTRRERTLAYAFSQQLRICSKRRSPKFNSMEANMSWSWLERWMATRLPETSSVESHAMKQYDPPNNNNKFTIMTRFLDAAAGEEKESCGSNEVPLHFDNYSINSPEEKISFKPHTAKTNFKPRRTVSKRKTVPSYQFHEEQPKESKRDGSGNACKDIKPKQKQVGSRT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01678 378 MobiDBLite consensus disorder prediction 70 101 - -
Cca05g01678 378 Pfam IQ calmodulin-binding motif 105 122 IPR000048 GO:0005515
Cca05g01678 378 ProSiteProfiles IQ motif profile. 103 132 IPR000048 GO:0005515
Cca05g01678 378 MobiDBLite consensus disorder prediction 318 378 - -
Cca05g01678 378 PANTHER IQ-DOMAIN 33 1 373 - -
Cca05g01678 378 MobiDBLite consensus disorder prediction 343 378 - -
Cca05g01678 378 PANTHER IQ-DOMAIN 5-RELATED 1 373 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01678 1 346 IQD Protein Family AT5G35670 40.099 6.81e-77 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01678 - - gsj:114383427 643.654