Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01661 ATGGCTTCGTTTTGTTCTAGCTTTATAATGAGTTTTGCCCTTTTGGCCCTCGTGTCGGGGAGTGCCAATGCATCACTTTACACAAACTTCTACTCCAGTTCTTGCCCAAAACTCTTTGACACTGTGAAATGCACAGTGGAATCGGCCATATCCAAGGAGGCTCGCATGGGTGCTTCTCTCCTACGTTTGTTCTTCCACGATTGCTTTGTTAATGGGTGTGATGGTTCGATTCTACTTGATGACACGTCAAGATTCACAGGAGAGAAGAACGCAGGTCCTAACAAGAACTCTGCAAGAGGATTTGAAGTGATAGACAAAATCAAGTCAGCTGTGGAAGAGGTGTGCCCCGGTGTCGTCTCCTGCGCAGACATCCTTGCCATTGCTGCCAGAGACTCAGTTGCCATCCTTGGAGGCCCAATATGGGATGTGAAACTTGGAAGAAGAGACGCCAGAACAGCAAGCCAATCTGCTGCCAACAACGACATCCCCGGACCCACTTCGAGCCTCAACCAACTCATCTCAAGATTCAACGCTCTCGGACTTTCCACCAAGGACTTGGTCTCGCTATCTGGGGGTCACACAATTGGACAGGCAAGGTGCACAACCTTTAGAGGTCACATCTACAATGACAGTAACATAGATAGCTACTTTGCCCGCATGAGACAATCTAGTTGCCCTAGAACCTCGGGGTCCGGGGACAACAACCTAGCACCCCTTGACCTTGCCACTCCCACGTTCTTCGACAATCACTACTTCAAGAACCTCATTCAGAAGAAGGGCCTCCTCCATTCTGACCAACAACTATTCAATGGCGGTTCCACTGACTCCATTGTTCGTACCTACAGCACCAACCCCACCTCATTTTTCGCTGATTTTTCCGCAGCCATGATCAAGATGGGAAACATTAGCCCCCTCACTGGCTCCCACGGAGAAATAAGGAAGAACTGCAGAAGGGTCAACTAA 963 0.4922 MASFCSSFIMSFALLALVSGSANASLYTNFYSSSCPKLFDTVKCTVESAISKEARMGASLLRLFFHDCFVNGCDGSILLDDTSRFTGEKNAGPNKNSARGFEVIDKIKSAVEEVCPGVVSCADILAIAARDSVAILGGPIWDVKLGRRDARTASQSAANNDIPGPTSSLNQLISRFNALGLSTKDLVSLSGGHTIGQARCTTFRGHIYNDSNIDSYFARMRQSSCPRTSGSGDNNLAPLDLATPTFFDNHYFKNLIQKKGLLHSDQQLFNGGSTDSIVRTYSTNPTSFFADFSAAMIKMGNISPLTGSHGEIRKNCRRVN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01661 320 SUPERFAMILY Heme-dependent peroxidases 26 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 ProSiteProfiles Plant heme peroxidase family profile. 25 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 Gene3D Peroxidase, domain 2 163 299 - -
Cca05g01661 320 CDD secretory_peroxidase 26 319 IPR033905 GO:0004601|GO:0042744
Cca05g01661 320 Pfam Peroxidase 43 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Cca05g01661 320 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Cca05g01661 320 Gene3D - 29 320 - -
Cca05g01661 320 PANTHER PEROXIDASE 9 320 - -
Cca05g01661 320 PANTHER PEROXIDASE 72-RELATED 9 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01661 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01661 Cca-Chr5 35987677 35990083 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01661 24 320 Peroxidase AT5G05340 74.411 3.78e-168 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01661 K00430 - gmx:100791414 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01335 05 31374017 31376570 Cca05g01661 05 35987677 35990083 ECH
Cca01g00599 01 7620329 7622775 Cca05g01661 05 35987677 35990083 ECH
Cca05g01661 05 35987677 35990083 Cca05g01661 05 35987677 35990083 ECH