Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca05g01655 | ATGTTTTCCAAAGAGCAAAAGAGAGCAGCTATGCATGAGAAGCTGCAACACCTTCGTTCTATTACTAACTCTCATGCTCTAAACAAAACCTCGATCATAATCGATGCATCAAAGTACATCGAAAAGTTAAAGCAAAAAGTAGAAAGACTGAATCAAGAGATAGCATCTGCAGAAACTTCCAGTGTCCACAACCCTTTGCCTATGGTCACAGTAGAAACCCTAGAAAAAGGATTTCTGATAAATGTTTTCTCAGCAAAAGGGTGTCCAGGTCTGCTTGTTTCCATATTGGAGGCTTTTGAAGAGATGAGACTCACTGTGCTGGAAGCTAGGGTTTCTTGTACAGACACTTTCCGATTTCAAGCAGTTGGAGAAAATGAAGAACAAGCGGAGACAATTGATGCACATGCTGTGAAAAAAGCAGTGGGACAAGCAATAAAGAACTGGAGCAAAAGTGGCGATCAAGACTAA | 468 | 0.4081 | MFSKEQKRAAMHEKLQHLRSITNSHALNKTSIIIDASKYIEKLKQKVERLNQEIASAETSSVHNPLPMVTVETLEKGFLINVFSAKGCPGLLVSILEAFEEMRLTVLEARVSCTDTFRFQAVGENEEQAETIDAHAVKKAVGQAIKNWSKSGDQD | 155 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca05g01655 | 155 | Gene3D | - | 3 | 66 | IPR036638 | GO:0046983 | |
Cca05g01655 | 155 | PANTHER | TRANSCRIPTION FACTOR BHLH FAMILY-RELATED | 2 | 154 | - | - | |
Cca05g01655 | 155 | CDD | ACT_UUR-ACR-like | 89 | 145 | - | - | |
Cca05g01655 | 155 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 2 | 154 | - | - | |
Cca05g01655 | 155 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 6 | 61 | IPR036638 | GO:0046983 | |
Cca05g01655 | 155 | Coils | Coil | 33 | 60 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca05g01655 | Cca-Chr5 | 35938490 | 35939978 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca05g01655 | 11 | 152 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT5G10570 | 27.848 | 1.64e-06 | 44.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca05g01655 | - | - | gmx:100306253 | 283.108 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca05g01655 | 05 | 35938490 | 35939978 | Cca01g01990 | 01 | 46469446 | 46471369 | ECH | |
Cca07g01714 | 07 | 43133252 | 43135320 | Cca05g01655 | 05 | 35938490 | 35939978 | ECH | |
Cca01g01990 | 01 | 46469446 | 46471369 | Cca05g01655 | 05 | 35938490 | 35939978 | ECH | |
Cca05g01331 | 05 | 31330512 | 31332682 | Cca05g01655 | 05 | 35938490 | 35939978 | ECH | |
Cca01g00600 | 01 | 7646423 | 7648577 | Cca05g01655 | 05 | 35938490 | 35939978 | ECH | |
Cca05g01655 | 05 | 35938490 | 35939978 | Cca05g01655 | 05 | 35938490 | 35939978 | ECH | |
Cca01g00237 | 01 | 2463013 | 2464906 | Cca05g01655 | 05 | 35938490 | 35939978 | PCT |