Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01651 ATGGGTGTGTTTCAAGTTTCAACTCCACCAAAGATGAAGCCTGCATCTGTCTCTAACGTCACTCAACTTGCGGAGCCTCTCCTTCTGCCACCGGACTGTGAACAATCTCCGGAAAACCAGACTCAGCAAAATGGATCCATTTCCGGAGCGGTCTTCAACATATCAACCACCATGATCGGCGCCGGAATCATGTCCATTCCGGCCACCATGAAGGTGCTGGGAATAGTTCCGGGCTTCCTGCTCATACTTTTGGTCGCACTCGTGACAGATGTCACTGTCGAGTTTATGCTACGCTACACAACTTCAGGTAAATCCACTACTTACGCCGGCATGATGGCCGAATCTTTTGGCTTCATAGGATCCCTCGCCGTCAAGATTTGCGTCATCATAACCAATTTTGGTATACTAATAATCTACTTCATTATTCTTGGTGACGTTCTGTGTGGAAATGAGTCGAATGGAACGACACACTTGGGTATTCTTCAAGAATGGTTTGGCATGTACTGGTGGACCTCTCGAGCTTTTGCTCTTCTCATTGTTGCCCTCTTTGTAATGCTTCCACTTGTTATGTTACGGCGTGTTGATTCACTGAGGTATAGTTCTGCAATATCAATCCTTCTAGCATTGGTGTTTATTGCAATATGCTCATCTATGGCCCTTAGTGCATTGTGGTCCGGCAAAACTCAATCACTGAGGATTGTGCCTGATTTCTCTCAAGTCACTGTCCTTGATCTTTTCACCACTGTCCCAATCTTCGTGACCGGTTTCGGCTTCCATGTCAACGTTCATCCAATTAGAGCAGAGCTTGGAAAAGCTTCACACATGGGTTTGGCCGTGCGAACTTCGTTAACAATCTGTGTGGCTATTTACTTCGCTATTGGCTTCTTTGCATACCTTTTGTTTGGTGATTCCATCATGCCCGATGTGCTAGTAAACTTTGACCAAAACTCCGACACCACTGCTGGTCGATTGCTGAATGACATTGTTCGGTTAAGCTATGCACTCCATCTTGCACTTGTGTTCCCCATCATGAACTATTCCTTTAGGGCCAACATAGATGAACTCATTTTCTCAAACAAAAATAAACCTCCACTTGCATCAGACACAACAAGATTTGTGTCACTCACTTTGACTCTGCTAGCCCTCACATACTTGGTGGCTGTGGCCATCCCAAACATATGGTATTTTTTTCAGTTCTTGGGATCCACAACCGTTGTTTGTACCTCATTCATCTTCCCTGCTGCTATCGTTCTAAGGGACATGCATGGCATATCAAAGACAAGAGATCAAGTCATGGCAATAGTGATCATAGTTTTGGCTGTGGGCACAAGTGGCATTGCTATTTGGACCAACTTCAATGGTTCAGGGACTGATTAG 1377 0.451 MGVFQVSTPPKMKPASVSNVTQLAEPLLLPPDCEQSPENQTQQNGSISGAVFNISTTMIGAGIMSIPATMKVLGIVPGFLLILLVALVTDVTVEFMLRYTTSGKSTTYAGMMAESFGFIGSLAVKICVIITNFGILIIYFIILGDVLCGNESNGTTHLGILQEWFGMYWWTSRAFALLIVALFVMLPLVMLRRVDSLRYSSAISILLALVFIAICSSMALSALWSGKTQSLRIVPDFSQVTVLDLFTTVPIFVTGFGFHVNVHPIRAELGKASHMGLAVRTSLTICVAIYFAIGFFAYLLFGDSIMPDVLVNFDQNSDTTAGRLLNDIVRLSYALHLALVFPIMNYSFRANIDELIFSNKNKPPLASDTTRFVSLTLTLLALTYLVAVAIPNIWYFFQFLGSTTVVCTSFIFPAAIVLRDMHGISKTRDQVMAIVIIVLAVGTSGIAIWTNFNGSGTD 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01651 458 PANTHER AMINO ACID TRANSPORTER 26 455 - -
Cca05g01651 458 Pfam Transmembrane amino acid transporter protein 44 432 IPR013057 -
Cca05g01651 458 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 26 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01651 Cca-Chr5 35897843 35901434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01651 28 451 Amino Acid or Auxin Permease AAAP Family AT3G56200 54.824 1.14e-159 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01651 - - gmx:100794031 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01651 05 35897843 35901434 Cca05g01651 05 35897843 35901434 ECH
Cca01g00240 01 2495414 2498361 Cca05g01651 05 35897843 35901434 PCT