Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca05g01638 | ATGACCTCGAAGTACCATTCTCAGGTTTTGCAACTTGGGGTGAGAAATGCAGCAGATTGGCACCATTTGTTTATCTGCTGCTGCTTGTGTTTGTGGTTTCTTCTGGTGCCAGTGCTGGGTGAAGAACGTTGGGATGGAGTGGTTGTGACACAATCAAACTTCCTGGCACTTCAAGCATTCAAGCAAGAGTTGGTGGATCCCAAAGGCTTCTTGAGAAGCTGGAATGACAGCGGCTATGGAGCATGTTCTGGAGGTTGGGTTGGTATCAAGTGTGCTCAGGGACAGGTTATTGTGATCCAGCTTCCGTGGAAGGGGTTGAAGGGGCATATCACTGAGAGGATTGGCCAACTTCGGGGGCTTAGAAAGCTTAGTCTTCACGATAACCAAATTGGTGGTTCAATCCCTTCAGCACTCGGACTTCTTCTCAATCTAAGAGGAGTTCAACTCTTCAACAATAGGTTCACAGGCTCCATCCCTCCTTCTTTAGGTTCCTGTCCTTTGCTTCAGTCATTAGACCTTAGTAACAATTTGCTCACTGAGAGAATCCCTATGAGCCTTGGGAATGCCACTAAGCTTTATTGGCTTAACTTGAGCTTTAATTCCTTTTCTGGCCCAATACCAACTAGCCTAACTAGCTTAACTTCTCTCACTTACCTGTCTCTTCAACACAATAATCTCTCTGGCTCTATTCCTAACTCATGGGGTGGTAGCTTGAAGAACCATTTCTTTCGGCTTCAAAATCTGATTTCTCTTGGTCATAACCAGTTTAGCGGAGCTATCCCAAATGAAATAGGAAGCCTTTCTAGACTTAAGACCGTAGATTTTTCCAATAATGCCTTGAATGGAAGCTTGCCTGCAACTCTCTCTAATTTATCCTCACTCACTCTGTTGAATGTAGAGAACAACGACCTAGGCAATCAAATCCCAGAAGCTTTAGGCAGATTGCAAAATCTTTCTGTTCTAGTTCTGAGAAGAAATCAATTTAGTGGCCACATTCCTCAAAGTATTGGAAACATTTCAAAGCTTACACAGCTCGATTTGTCGCTGAATAATCTCAATGGTGAAATTCCAGTCTCCTTAGACAATCTGCGCAGTCTTAATCACTTAAACGTTTCTCATAACAACCTCTCTGGTCCTGTTCCAACCCTACTTGCCCATAAATTTAACTCAAGTTCATTTGAGGGAAATATTCAACTATGTGGGTACAGCCCTTCAACCCCATGTTCCTCGCCAGCTCCTTCTGGCTCGCCTTCTGAAATGTCAAAACACCATCATAAGAAACTAGGCTCCAAAGACATAATCCTCATAGTAGCGGGAGTGCTCCTTGTACTCTTGTTAACACTTTGCTGCATTCTGCTATTCTGCCTGATCAGAAAAAGAGCAACATCAAATGCAGAGAGTGGCCAGGCCACAGGGAGAGCATCTGCCACCAGGACAGAAAAAGGAGTTCCTCCTGTTGCAGGTGGTGAAGCTGAGGCAGGTGGCGAGGCTGGAGGTAAACTAGTCCATTTTGATGGACCATTGGCTTTTACAGCTGATGATCTCTTGTGTGCAACAGCAGAGATAATGGGAAAAAGCACATACGGAACTGTGTATAAGGCTACATTAGAGGATGGAAGTCAAGCTGCAGTGAAACGGTTGAGGGAAAAGATCACTAAAGGTCAGAGAGAATTTGAATCTGAAGTTGGTGTTATAGGAAGAATTCGACACCCAAATCTTTTGGCATTAAGAGCCTACTACTTGGGACCCAAAGGAGAAAAGCTTTTAGTATTTGATTACATGCCTAAGGGAAGTCTTGCTTCTTTCCTACATGCTCGTGGGCACGAAACAGTCATTGATTGGCCGACAAGGATGAAAATAGCACAGGGAATGGCTCGTGGCTTGTTATACCTTCATTCACAGGAGAACATTATACATGGGAATCTTACGTCCAGCAATGTGCTGCTGGATGAGAACACGAATGCTAAAATAGCTGATTTTGGTCTTTCTCGGTTGATGACAACTGCTGCTAATTCTAACGTGATTGCCACTGCTGGAGCATTGGGCTACCGAGCACCTGAGCTCTCAAAGCTTAAAAAAGCCAACACAAAAACTGACGTATACAGTCTTGGTGTCATCTTGTTAGAACTCCTAACGGGGAAGCCACCTGGTGAGGCTATGAATGGCGTGGATTTACCTCAGTGGGTTGCCTCTATTGTCAAAGAGGAGTGGACAAATGAGGTTTTCGATGTAGAGTTGATGAGAGATGCTTCAACATATGGCGACGAGATGCTAAACACGTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGGCCAGAAGTTCAGCAAGTCCTTCAGCAGCTAGAAGAGATTAGACCAGAGATATCAGCCAGTTCGGGTGATGATGGTGCTATCCCTTCGACCAGTGAATAA | 2424 | 0.446 | MTSKYHSQVLQLGVRNAADWHHLFICCCLCLWFLLVPVLGEERWDGVVVTQSNFLALQAFKQELVDPKGFLRSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGLKGHITERIGQLRGLRKLSLHDNQIGGSIPSALGLLLNLRGVQLFNNRFTGSIPPSLGSCPLLQSLDLSNNLLTERIPMSLGNATKLYWLNLSFNSFSGPIPTSLTSLTSLTYLSLQHNNLSGSIPNSWGGSLKNHFFRLQNLISLGHNQFSGAIPNEIGSLSRLKTVDFSNNALNGSLPATLSNLSSLTLLNVENNDLGNQIPEALGRLQNLSVLVLRRNQFSGHIPQSIGNISKLTQLDLSLNNLNGEIPVSLDNLRSLNHLNVSHNNLSGPVPTLLAHKFNSSSFEGNIQLCGYSPSTPCSSPAPSGSPSEMSKHHHKKLGSKDIILIVAGVLLVLLLTLCCILLFCLIRKRATSNAESGQATGRASATRTEKGVPPVAGGEAEAGGEAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKGQREFESEVGVIGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGHETVIDWPTRMKIAQGMARGLLYLHSQENIIHGNLTSSNVLLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVELMRDASTYGDEMLNTLKLALHCVDPSPSARPEVQQVLQQLEEIRPEISASSGDDGAIPSTSE | 807 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca05g01638 | 807 | MobiDBLite | consensus disorder prediction | 466 | 494 | - | - | |
Cca05g01638 | 807 | Gene3D | Ribonuclease Inhibitor | 51 | 207 | IPR032675 | - | |
Cca05g01638 | 807 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED | 23 | 798 | - | - | |
Cca05g01638 | 807 | Pfam | Protein tyrosine and serine/threonine kinase | 520 | 785 | IPR001245 | GO:0004672|GO:0006468 | |
Cca05g01638 | 807 | Gene3D | Transferase(Phosphotransferase) domain 1 | 595 | 799 | - | - | |
Cca05g01638 | 807 | MobiDBLite | consensus disorder prediction | 788 | 807 | - | - | |
Cca05g01638 | 807 | Pfam | Leucine rich repeat N-terminal domain | 55 | 91 | IPR013210 | - | |
Cca05g01638 | 807 | Pfam | Leucine rich repeat | 317 | 376 | IPR001611 | GO:0005515 | |
Cca05g01638 | 807 | Pfam | Leucine rich repeat | 167 | 226 | IPR001611 | GO:0005515 | |
Cca05g01638 | 807 | Gene3D | Ribonuclease Inhibitor | 208 | 306 | IPR032675 | - | |
Cca05g01638 | 807 | Gene3D | Ribonuclease Inhibitor | 307 | 408 | IPR032675 | - | |
Cca05g01638 | 807 | SMART | LRR_typ_2 | 213 | 236 | IPR003591 | - | |
Cca05g01638 | 807 | SMART | LRR_typ_2 | 291 | 315 | IPR003591 | - | |
Cca05g01638 | 807 | SMART | LRR_typ_2 | 363 | 386 | IPR003591 | - | |
Cca05g01638 | 807 | SMART | LRR_typ_2 | 267 | 290 | IPR003591 | - | |
Cca05g01638 | 807 | SMART | LRR_typ_2 | 117 | 141 | IPR003591 | - | |
Cca05g01638 | 807 | ProSiteProfiles | Protein kinase domain profile. | 517 | 792 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca05g01638 | 807 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED | 23 | 798 | - | - | |
Cca05g01638 | 807 | Gene3D | Phosphorylase Kinase; domain 1 | 523 | 594 | - | - | |
Cca05g01638 | 807 | SUPERFAMILY | L domain-like | 96 | 384 | - | - | |
Cca05g01638 | 807 | CDD | STKc_IRAK | 523 | 788 | - | - | |
Cca05g01638 | 807 | SUPERFAMILY | Protein kinase-like (PK-like) | 521 | 789 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca05g01638 | Cca-Chr5 | 35824547 | 35827315 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca05g01638 | 44 | 790 | Receptor kinase-like Gene Family | AT3G51740 | 63.307 | 0.0 | 926 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Cca05g01638 | PK_Tyr_Ser-Thr | 3.4e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca05g01638 | - | - | gmx:100811174 | 1259.97 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca05g01638 | 05 | 35824547 | 35827315 | Cca01g01959 | 01 | 45831415 | 45835433 | ECH | |
Cca05g01638 | 05 | 35824547 | 35827315 | Cca05g01638 | 05 | 35824547 | 35827315 | ECH | |
Cca01g00251 | 01 | 2602656 | 2605803 | Cca05g01638 | 05 | 35824547 | 35827315 | PCT |