Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01604 ATGGCTGTGTCCAACGGCGTCGAAGCAGTGTTAGACTTTTTAAGGAAGAATGGCTTGTCGGAAGCAGAGTCCGCGCTCAGAGAAGACATCATCCAGAACACCGACCTCGGAAACTTCGACTACGAGAAGTTCTTCTTCCCCATGGTCccgccgccgccgccggtcagactccgatccttctcgcaaccctcgctcctcgccgccgccgccgccgACTGCTCCAAATCCAGCTCCGACGAGTTCGTCAGCATCGCCTCCGCCTCCTCCACTTCTCGCGTCTCTTCTGCAGAATTTATAAATCCATATGGAATCCGTTCCTCGTCCCAGACTCAGAATGATTCTGATTCTTCGTCTGAAAGATTATCTCAGTTTGGCACAGCGCGTGATTATCACGATTTTGATATGCAAAATGAGCCATATTGGTATAATGAAAAGGATGATGATCACTTCATGACTCCTAATTTTGAAGGGCCGGATTTCTTCGCGTGTCAAAGTGAGGATAAGTTTGTCATGACAGCAGAAACGGAAAACCAGCATGGCAATTTGGAGCTTAGTTACAACAATGAGGAGTTTCGATTAGAGGGAAATAGTAATGGTGGTTACATGGACAAGGCATGCCTTTATAATCATTCCTCTGTGGGGGATGGAACTGTGACTTTTTCAGAAGGCAATTGTCATGTTGATAGCAATGACCAGTTTAAAGGGGAATTAGAGGGCAAGGCTAAAAATCACACTGTTTCCTGTAGTTGTGAAGTTCCATTTTGCAAAAGCAGTCCAGGTTCAGGAGAATCTTGCAGTTTGGATCCTACAAACTTCAGCTACCCTAATTTGAAGGAAATCCGTCTGAATGATTTTCACTTGAAGGTTGTTGGGGACATTAACTCTTTTGATTCTACTTCAGAGCTAACTGTGAATCAAAGTTTTGACTACTACACTAAAAATGACAGCAATAAGGAGTACAAGGGTCCCTATGACTTAACTATCAAAGTTACTGAAAAAGATCTAACAAATGGACTTGACACCTATGAAGCAGATGATGGAGAATTAGCTGAAGAGTGTCAAGATCAAGAAGTTGCTGCAGATGGAGATGATACTACAGATGATGAGCTCTTAAAGTATACTCAAGAGGAAGAATACGAAGTATTTGATCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAACAAGGAACTGCCCATTGTGCTAAATACAGTGTTGGCTGGAAGGTATTATGTAACAGAATATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGACGGGAATAGATGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTTTTTGATCAAAGTTTGGATGAAATCAAGCTTCTAAAACTTGTCAACAAGCATGACCCAGCAGATAAACACCACATTTTGCGCCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATCGTAACTGAACTTCTGCGGGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGAAGGGGAAGCCTATTTTACATTGAACAGATTGCAGCTCATTACTCGTCAGTGTTTGGAAGCATTGCAATACTTGCATAGCTTGGGAATTGTTCACTGTGACTTGAAGCCAGAAAACATTCTAATCAAAAGTTACAGAAGATGTGAGATAAAGGTTATTGATCTTGGAAGTAGTTGCTTCCAAACAGACACTCTGTGCCTATATGTACAGTCCCGATCCTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGATATATGGTCTCTCGGCTGTATCTTGGCTGAACTATGCTCTGGTGAAGTGCTGTTTCCAAATGATGCAGTTGTGATGATTCTGGCACGCATGATTGGAATGCTTGGTTCCATTGATATGGAGATGTTGGTGAAGGGGCAAGAAACGCACAAGTACTTCACCAAAGAATATGATATTTATTTTGTAAATGAGGACACTGATCAATTGGAGTACATAATTCCAGAAGAGACATCATTGGAGCAGCACCTACAGGTTACTGATACTATGTTTATAGACTTTGTCAGACACTTGCTTAGCATCAACCCCAAAAGAAGGCCTACTGCAAGACAAGCACTAAAGCATCCATGGCTTTCTTATGTCTACTAG 2160 0.394 MAVSNGVEAVLDFLRKNGLSEAESALREDIIQNTDLGNFDYEKFFFPMVPPPPPVRLRSFSQPSLLAAAAADCSKSSSDEFVSIASASSTSRVSSAEFINPYGIRSSSQTQNDSDSSSERLSQFGTARDYHDFDMQNEPYWYNEKDDDHFMTPNFEGPDFFACQSEDKFVMTAETENQHGNLELSYNNEEFRLEGNSNGGYMDKACLYNHSSVGDGTVTFSEGNCHVDSNDQFKGELEGKAKNHTVSCSCEVPFCKSSPGSGESCSLDPTNFSYPNLKEIRLNDFHLKVVGDINSFDSTSELTVNQSFDYYTKNDSNKEYKGPYDLTIKVTEKDLTNGLDTYEADDGELAEECQDQEVAADGDDTTDDELLKYTQEEEYEVFDLRIIHRKNRTGFEENKELPIVLNTVLAGRYYVTEYLGSAAFSRVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESEGEAYFTLNRLQLITRQCLEALQYLHSLGIVHCDLKPENILIKSYRRCEIKVIDLGSSCFQTDTLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMLGSIDMEMLVKGQETHKYFTKEYDIYFVNEDTDQLEYIIPEETSLEQHLQVTDTMFIDFVRHLLSINPKRRPTARQALKHPWLSYVY 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01604 719 Pfam Protein kinase domain 415 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g01604 719 Gene3D Transferase(Phosphotransferase) domain 1 467 715 - -
Cca05g01604 719 PANTHER DUAL SPECIFICITY PROTEIN KINASE 8 719 - -
Cca05g01604 719 SUPERFAMILY Protein kinase-like (PK-like) 402 716 IPR011009 -
Cca05g01604 719 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 8 719 - -
Cca05g01604 719 CDD PKc_DYRK_like 413 715 - -
Cca05g01604 719 Gene3D Phosphorylase Kinase; domain 1 408 494 - -
Cca05g01604 719 SMART serkin_6 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g01604 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Cca05g01604 719 ProSiteProfiles Protein kinase domain profile. 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01604 Cca-Chr5 35366797 35371681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01604 410 710 MAP Kinase Gene Family AT5G19010 32.087 3.04e-35 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Cca05g01604 Pkinase 1.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01604 - - gmx:100783988 1273.84