Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01603 ATGACATTGAATGAGGTATCCACGTCGAGAGCCCACATGCACTTTGGGGACGTTAGTGACCAAATCACTGGAGCAGAATTTATAAATCCATATGGAATCCGTTCCTCGTCCCAGACTCAGAATGATTCTGATTCTTCGTCTGAAAGATTATCTCAGTTTGGCACAGCGCGTGATTATCACGATTTTGATATGCAAAATGAGCCATATTGGTATAATGAAAAGGATGATGATCACTTCATGACTCCTAATTTTGAAGGGCCGGATTTCTTCGCGTGTCAAAGTGAGGATAAGTTTGTCATGACAGCAGAAACGGAAAACCAGCATGGCAATTTGGAGCTTAGTTACAACAATGAGGAGTTTCGATTAGAGGGAAATAGTAATGGTGGTTACATGGACAAGGCATGCCTTTATAATCATTCCTCTGTGGGGGATGGAACTGTGACTTTTTCAGAAGGCAATTGTCATGTTGATAGCAATGACCAGTTTAAAGGGGAATTAGAGGGCAAGGCTAAAAATCACACTGTTTCCTGTAGTTGTGAAGTTCCATTTTGCAAAAGCAGTCCAGGTTCAGGAGAATCTTGCAGTTTGGATCCTACAAACTTCAGCTACCCTAATTTGAAGGAAATCCGTCTGAATGATTTTCACTTGAAGGTTGTTGGGGACATTAACTCTTTTGATTCTACTTCAGAGCTAACTGTGAATCAAAGTTTTGACTACTACACTAAAAATGACAGCAATAAGGAGTACAAGGGTCCCTATGACTTAACTATCAAAGTTACTGAAAAAGATCTAACAAATGGACTTGACACCTATGAAGCAGATGATGGAGAATTAGCTGAAGAGTGTCAAGATCAAGAAGTTGCTGCAGATGGAGATGATACTACAGATGATGAGCTCTTAAAGTATACTCAAGAGGAAGAATACGAAGTATTTGATCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAACAAGGAACTGCCCATTGTGCTAAATACAGTGTTGGCTGGAAGGTATTATGTAACAGAATATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGACGGGAATAGATGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTTTTTGATCAAAGTTTGGATGAAATCAAGCTTCTAAAACTTGTCAACAAGCATGACCCAGCAGATAAACACCACATTTTGCGCCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATCGTAACTGAACTTCTGCGGGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGAAGGGGAAGCCTATTTTACATTGAACAGATTGCAGTTAATTCCGCCGCCGGTCAGACTCCGATCCTTCTCGCAACCCTCGCTCCTcgccgccgccgccgccgACTGCTCCAAATCCAGCTCCGACGAGTTCGTCAGCATCGCCTCCGCCTCCTCCACTTCTCGCGTCTCTTCTGCAGGTACTCCTAACTCCAAAGTCTCTCTCGCTCTTCGAATTCAATTCAATTATTTGGTGCTAATGCTCAATTTGCATGTGCtgataattgaccactga 1587 0.3995 MTLNEVSTSRAHMHFGDVSDQITGAEFINPYGIRSSSQTQNDSDSSSERLSQFGTARDYHDFDMQNEPYWYNEKDDDHFMTPNFEGPDFFACQSEDKFVMTAETENQHGNLELSYNNEEFRLEGNSNGGYMDKACLYNHSSVGDGTVTFSEGNCHVDSNDQFKGELEGKAKNHTVSCSCEVPFCKSSPGSGESCSLDPTNFSYPNLKEIRLNDFHLKVVGDINSFDSTSELTVNQSFDYYTKNDSNKEYKGPYDLTIKVTEKDLTNGLDTYEADDGELAEECQDQEVAADGDDTTDDELLKYTQEEEYEVFDLRIIHRKNRTGFEENKELPIVLNTVLAGRYYVTEYLGSAAFSRVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESEGEAYFTLNRLQLIPPPVRLRSFSQPSLLAAAAADCSKSSSDEFVSIASASSTSRVSSAGTPNSKVSLALRIQFNYLVLMLNLHVLIIDH 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01603 528 SUPERFAMILY Protein kinase-like (PK-like) 331 435 IPR011009 -
Cca05g01603 528 ProSiteProfiles Protein kinase domain profile. 342 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g01603 528 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 18 452 - -
Cca05g01603 528 Pfam Protein kinase domain 344 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g01603 528 Gene3D Phosphorylase Kinase; domain 1 337 423 - -
Cca05g01603 528 PANTHER DUAL SPECIFICITY PROTEIN KINASE 18 452 - -
Cca05g01603 528 MobiDBLite consensus disorder prediction 32 51 - -
Cca05g01603 528 Gene3D Transferase(Phosphotransferase) domain 1 396 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01603 Cca-Chr5 35359676 35365371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01603 333 435 EF-hand Containing Proteins AT5G22840 33.645 6.36e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Cca05g01603 Pkinase 3.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01603 - - ccaj:109791085 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01603 05 35359676 35365371 Cca05g01603 05 35359676 35365371 ECH