Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01599 ATGTCGAAACAGACATACAGCGTGTGCTTCTGCTGGCGGCGGCGCTTCAAGCTGGCTCTGGCGGAGGCGCCGTCGGAGATCAAGACCCTCTTTGACCAATACTCCGAGAATGAGGTGATGACGCCTTCCCTTCTTCAACGCTTCCTCGTCCAAGTGCAGAGGCAAGAGAAGGCCACCGAAGAAGAGGCCCAAGCCATCATCGACCGCTTCAGGCATTTCCATCGCAGGGGCGTTGGCCTCAACCTCGAAAGTTTCTTCAAGTTTCTCTTCAGTGACGATAACCCTCCTCTCCTTTCTTCTCATGGGGTGCACCATGATATGACTTTACCCTTGTCACATTATTTCATATATACTGGCCATAATTCCTATTTAACTGGGAATCAGTTGAGCAGCGACTGCAGTGATGTCCCCATCATAAATGCACTGAAGAGAGGTGTGAGAGTGATTGAATTGGACATATGGCCTAATGCATCAAAGGATAATATCGATGTTCTTCATGGAAGGACATTGACTACTCCTGTAGAGCTCATCAGATGTTTGAGGTCTATTAAGGAACATGCTTTTGAGGCATCAGATTATCCAGTTGTGATAACCCTAGAAGACCACCTTACGCCAGAACTTCAGGCTAAAGTGGCTGAGATGGTTTCTCATACATTTGGAGACATACTATTTACTCCTAACTCGGAAAGTGTGAAGGAATTCCCCTCTCCTGAATCACTTAAAAAGAGGATTATTATATCAACCAAACCACCTAAGGAATACCTCGAGGCAAAAGAAAAGGAAAAAGGGGATGAGTCACAGCAAGGAAAGGAAAAAGGGGATGATTCACAGCACGAAAAGGCATCAGGCGAAGATGAAGCTTGGGGGAAGGAAGTCCCAAGCTTGAGAGGTGATACTATAGCTGATTACAAGGACAACAATGTGGATGAAGATCTTAATGATGATGAAGAATTTGATGAATCAGACAAGTTACAGCATAATGAAGCTCCAGAATATAGACGCCTAATTGCCATTCATGCTGGGAAGCCTAAAGGGGGATTAACGGAATGCCTCAAAGTGGATCCTGACAAAGTGAGACGTCTAAGTTTAAGTGAGCAACAGCTTGAAAAGGCTGCTACAAGTCATGGAAAAGAAATTGTCAGGTTTACTCAGCGGAATATATTGAGGGTGTATCCCAAAGGTACTCGCATTGACTCATCAAATTATAACCCATTAATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGTTATGGGAGATCACTTTGGTTGATGCATGGAATGTTCAGAGCCAATGGAGGGTGTGGTTATGTTAAAAAACCAGATTTTCTATTAAAGACTGGTCCAAATAATGAGGTCTTTGATCCTAAAGCTAAGTTACCTGTGAAGACTACTTTGAAGGTGACTGTATATATGGGGGAAGGATGGTACTATGATTTCAAGCATACCCACTTCGATCAATACTCACCTCCAGACTTCTACACTAGAGTGGGGATTGCTGGAGTCCCCAGTGATACTGTAATGAAGAGAACTAAAGCAATAGAGGATAATTGGTTGCCTACATGGAATGAGGTATTCGAGTTCCCTCTTACAGTTCCAGAACTCGCCTTGCTTCGCATAGAAGTTCATGAGTATGACATGTCTGAGAAAGATGACTTTGGTGGACAAACATGTCTACCTATCGCGGAGCTAAGAAGTGGCATTCGAGCAATTCCACTGTATAGCCAAAAGGGAGAAAAATACACCTCAGTAAAGCTTCTCATGCGCTTTGAATTTGTTTGA 1794 0.4392 MSKQTYSVCFCWRRRFKLALAEAPSEIKTLFDQYSENEVMTPSLLQRFLVQVQRQEKATEEEAQAIIDRFRHFHRRGVGLNLESFFKFLFSDDNPPLLSSHGVHHDMTLPLSHYFIYTGHNSYLTGNQLSSDCSDVPIINALKRGVRVIELDIWPNASKDNIDVLHGRTLTTPVELIRCLRSIKEHAFEASDYPVVITLEDHLTPELQAKVAEMVSHTFGDILFTPNSESVKEFPSPESLKKRIIISTKPPKEYLEAKEKEKGDESQQGKEKGDDSQHEKASGEDEAWGKEVPSLRGDTIADYKDNNVDEDLNDDEEFDESDKLQHNEAPEYRRLIAIHAGKPKGGLTECLKVDPDKVRRLSLSEQQLEKAATSHGKEIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPDFLLKTGPNNEVFDPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPSDTVMKRTKAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPIAELRSGIRAIPLYSQKGEKYTSVKLLMRFEFV 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01599 597 MobiDBLite consensus disorder prediction 252 292 - -
Cca05g01599 597 ProSiteProfiles C2 domain profile. 450 579 IPR000008 -
Cca05g01599 597 SUPERFAMILY EF-hand 16 107 IPR011992 -
Cca05g01599 597 Gene3D C2 domain 464 597 IPR035892 -
Cca05g01599 597 SMART plcy_3 332 449 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Cca05g01599 597 MobiDBLite consensus disorder prediction 252 323 - -
Cca05g01599 597 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 2 597 - -
Cca05g01599 597 SUPERFAMILY PLC-like phosphodiesterases 105 450 IPR017946 GO:0006629|GO:0008081
Cca05g01599 597 Gene3D - 21 101 - -
Cca05g01599 597 PRINTS Phospholipase C signature 110 128 IPR001192 GO:0035556
Cca05g01599 597 PRINTS Phospholipase C signature 136 156 IPR001192 GO:0035556
Cca05g01599 597 PRINTS Phospholipase C signature 233 250 IPR001192 GO:0035556
Cca05g01599 597 PRINTS Phospholipase C signature 387 408 IPR001192 GO:0035556
Cca05g01599 597 PRINTS Phospholipase C signature 408 426 IPR001192 GO:0035556
Cca05g01599 597 PRINTS Phospholipase C signature 563 573 IPR001192 GO:0035556
Cca05g01599 597 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 362 448 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Cca05g01599 597 Pfam Phosphoinositide-specific phospholipase C, efhand-like 25 92 IPR015359 -
Cca05g01599 597 Coils Coil 49 69 - -
Cca05g01599 597 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 105 249 - -
Cca05g01599 597 SMART C2_3c 469 577 IPR000008 -
Cca05g01599 597 Pfam C2 domain 470 571 IPR000008 -
Cca05g01599 597 SMART plcx_3 105 249 IPR000909 -
Cca05g01599 597 Gene3D Phosphatidylinositol (PI) phosphodiesterase 102 462 IPR017946 GO:0006629|GO:0008081
Cca05g01599 597 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 597 IPR001192 GO:0035556
Cca05g01599 597 Pfam Phosphatidylinositol-specific phospholipase C, X domain 107 249 IPR000909 -
Cca05g01599 597 CDD C2_PLC_like 467 596 - -
Cca05g01599 597 CDD PI-PLCc_plant 104 436 - -
Cca05g01599 597 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 361 447 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Cca05g01599 597 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 469 596 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01599 Cca-Chr5 35289298 35294112 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01599 1 597 Acyl Lipid Metabolism Gene Families AT3G55940 69.601 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01599 K05857 - gmx:100037460 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01259 05 30171331 30178018 Cca05g01599 05 35289298 35294112 ECH
Cca05g01599 05 35289298 35294112 Cca05g01599 05 35289298 35294112 ECH
Cca01g00295 01 3149837 3164911 Cca05g01599 05 35289298 35294112 PCT