Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01594 ATGGcctccatgctgccactcttgctcctcctcatcatcggcgccgtcctcctcctcctcctccaccGGCGCTCCCGGCAACGGCGCCTCCGCGTTCCGCCGGGGAGCCTGGGCCTGCCCTTCGTGGGCGAGACCCTGCAGCTGGTGTCGGCCTACAAGAGCGAGAACCCGGAGCCCTTCATCGACGAGCGCGTGAAGCGGTACGGCCCAATCTTCACAACCCACGTGCTGGGCGAGCCCACGGTGTTCTCCACCGACCCCGAAGTGAACCGTTTCGTTCTGATGAACGAAGGGAAACTGTTCGAGTGCAGCTACCCAGCCTCCATATGCAACCTCCTCGGCAAACACTCCCTGGTCCTCATGAAAGGGTCCCTCCACAAGCGAATGCATTCCCTCACCATGAGCTTCGCCAACTCCGCCATCATCAAGGACCATTTGTTGCTCGACATCGACCGCCTCATTCGCCTCAACTTCGATTCCTGGTCCCACCGGGTTCTCCTCTTGGAAGAAGCCAAAAAGATAACTTTTGAGTTGACACTGAAGCAGCTCATAAGCTTTGATCCAAATGAATGGACTGAGAGTCTAAGGAAAGAGTACGTTCTTGTGATCGAAGGATTTTTCACACTCCCCTTCCCCCTATTCTCCTCTACCTACCGTAGAGCCATCAAGGCTAGAACGAAGGTGGCAGAGGCATTAACGTTGATAGTGAGGCAAAGAAGAAAAGAAAGCATGGTTGGGGAGAAAAAGAATGACATGCTAGGGGCATTGTTGGCCTCCGGCTACCACTTTTCCGACGAGGAAATAGTGGATTTCATGTTGGCGTTGCTCGTGGCCGGCTACGAAACCACCTCTACCACCATGACTTTTGCCGTCAAGTTCCTCACCGAGAATCCTCTAGCATTGGCACACCTCAAGGAAGAGCATGATCAAATCAGAGCCAAGAAGAGTTCCTCTGACGCACCACTGGAGTGGACAGATTATAAGTCAATGGCATTTACTCAATGCGTTGTGAATGAGACCTTGAGGATCGCTAACATAATTGGTGGGATATTTAGGAAAACAATGACTGACATCAACATAAAAGGTTACACTATTCCAAAGGGATGGAGGATCATTGCTTCATTTCGTGCTGTACATCTAAACCCTGACCATTACGAAGATGCACGCACCTTCAATCCATGGAGATGGCAGAGTAACTCAGAAGCAACTAGCCCTGGAAATCTTTATACCCCGTTTGGAGGAGGGCCACGGTTATGCCCTGGCTATGAGCTTGCCAGAGTGGTTCTCTCTGTCTTCCTTCACCGCATTGTCACCCGTTATAGTTGGATTCCTGCAGAAGAAGATAAGTTGGTGTTTTTCCCAACCACTAGGACGCAGAAGAGGTACCCTATCATAGTGAAACGTAGAGAGGAGCCCATACCAAGTAAATTGCCATGA 1437 0.4871 MASMLPLLLLLIIGAVLLLLLHRRSRQRRLRVPPGSLGLPFVGETLQLVSAYKSENPEPFIDERVKRYGPIFTTHVLGEPTVFSTDPEVNRFVLMNEGKLFECSYPASICNLLGKHSLVLMKGSLHKRMHSLTMSFANSAIIKDHLLLDIDRLIRLNFDSWSHRVLLLEEAKKITFELTLKQLISFDPNEWTESLRKEYVLVIEGFFTLPFPLFSSTYRRAIKARTKVAEALTLIVRQRRKESMVGEKKNDMLGALLASGYHFSDEEIVDFMLALLVAGYETTSTTMTFAVKFLTENPLALAHLKEEHDQIRAKKSSSDAPLEWTDYKSMAFTQCVVNETLRIANIIGGIFRKTMTDINIKGYTIPKGWRIIASFRAVHLNPDHYEDARTFNPWRWQSNSEATSPGNLYTPFGGGPRLCPGYELARVVLSVFLHRIVTRYSWIPAEEDKLVFFPTTRTQKRYPIIVKRREEPIPSKLP 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01594 478 SUPERFAMILY Cytochrome P450 25 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 PRINTS P450 superfamily signature 278 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 PANTHER CYTOCHROME P450 26 9 468 - -
Cca05g01594 478 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 PRINTS E-class P450 group I signature 267 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 PRINTS E-class P450 group I signature 287 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 PRINTS E-class P450 group I signature 374 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Cca05g01594 478 Pfam Cytochrome P450 33 134 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 Pfam Cytochrome P450 209 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 Gene3D Cytochrome P450 21 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01594 478 PANTHER CYTOCHROME P450 90A1 9 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01594 Cca-Chr5 35229919 35234895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01594 121 470 Cytochrome P450 AT5G05690 77.208 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01594 K09588 - gmx:100775886 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01594 05 35229919 35234895 Cca05g01594 05 35229919 35234895 ECH
Cca01g00307 01 3311200 3316382 Cca05g01594 05 35229919 35234895 PCT