Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01575 ATGGACGAGGGCATGTCAGGCTTTTGCATCAGATCAGGAAGTGTCCGTGGCAAAAGTGGCAACACTGGCAGTGGCACTAAGTGTGGGCGTTGGAATCCCACCACTGAACAGGTTAAACTTCTAACTGAACTATTCAGACAGAAGCGACGTAAGGTATCCTTTGATGACAAGGATGTCATTCGAAGAGAAAAAAACTCTATCATTGCTTCTGCACAATGTCTTGAAGATCAGATGTATCAAGTTTCAGAGCCAGATAGGGTGATTGAGACTCTTCAACTCTTCCCCTTAAACTCCTTTGGGGAATCTGAACCAGAGAAGCTGAGGTTTCATGCAAATGAATGTAGGGATGATAATACAATTTTTTCATACACAATGGGAGAACAAATGGAGCACCCACCATTAGACCTGCGCTTGAGCTTTCTGTAA 426 0.4366 MDEGMSGFCIRSGSVRGKSGNTGSGTKCGRWNPTTEQVKLLTELFRQKRRKVSFDDKDVIRREKNSIIASAQCLEDQMYQVSEPDRVIETLQLFPLNSFGESEPEKLRFHANECRDDNTIFSYTMGEQMEHPPLDLRLSFL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01575 141 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 46 130 IPR044555 GO:0003700|GO:0099402
Cca05g01575 141 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 46 IPR044555 GO:0003700|GO:0099402
Cca05g01575 141 PANTHER WUSCHEL-RELATED HOMEOBOX 7 46 130 - -
Cca05g01575 141 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01575 Cca-Chr5 35001562 35002738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01575 8 141 Wox Gene Family AT3G11260 37.569 1.22e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01575 - - pvu:PHAVU_008G226100g 203.756