Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01546 ATGGACCCCGCTACCTTACCTACCCTTCATGTGACCATGGCTCACAAGGTCCTTGGCAGGCTAAGCCTTCTTTTCACTCTAATCTCCACTCTGGTAATTAATCATGCACATTCCAAGAATAATGATCGGAAGACATATATAGTCTACATGGGCGATCACCCTAAGGGCATGGACCCCGCTACCTTACCTACCCTTCATGTGACCATGGCTCACAAGGTCCTTGGCAGTGACATAGAACCCGCAGAAGCTATACTTCACAGCTACAAGAAAAGCTTTAATGGTTTTGTGGTGAAGTTAACAGAAGATGAGGCAGAAAGAATGGCAGAAATGGAGGACGTTGTTTCTGTCTTCCCGAACAAGAAGAATCGGCTTCACACAACGAAATCGTGGGACTTCATAGGCGTGTCGCCGCAAGTCAAAAGGTCAAACATAGAGAGTGACATAATCGTTGGAGTAATAGACTCAGGAGTTTGGCCAGAGTCCAAGAGCTTCAGTGACCAAGGATTTGGTCCTCCACCAAAAAAATGGAAGGGGTCATGCCACAACTTTACCTGCAACAACAAAATAATCGGAGCAAAATACATCAATATCGAAGGTTACTATTCGAAAAGCGATATCATATCTCCAATAGACACAGGAGGGCACGGGACACACACAGCTTCCATGGTTGCTGGGAATTGGGTGAACTCTGCGAGTGTCTTAGGATTTGGCTCAGGGACAGCGCGTGGAGCATTTGATGAAGCAATTGCCGATGGAGTTGATATCATTTCCCTTTCACTTGGACCATTTGAACCCAAGCACTACTTTGAAGACGCCATAGATATTGGAAGTTTCCATGCAATGAAAAGAGGCATCTTAACGTCACATGCAGCCGGTAACGACGGTCCAAGGCCTTCCACTATCACAAATTATTCACCTTGGCTTCTTTCTGTCGCAGCTACCACTATTGATAGGAAGTTCATGTTGGGTACAGCTGCCAAGCCactttcggtggcttttctcctccatcaaactttgaaagtttcgtgcctggttccattagagtag 1047 0.4327 MDPATLPTLHVTMAHKVLGRLSLLFTLISTLVINHAHSKNNDRKTYIVYMGDHPKGMDPATLPTLHVTMAHKVLGSDIEPAEAILHSYKKSFNGFVVKLTEDEAERMAEMEDVVSVFPNKKNRLHTTKSWDFIGVSPQVKRSNIESDIIVGVIDSGVWPESKSFSDQGFGPPPKKWKGSCHNFTCNNKIIGAKYINIEGYYSKSDIISPIDTGGHGTHTASMVAGNWVNSASVLGFGSGTARGAFDEAIADGVDIISLSLGPFEPKHYFEDAIDIGSFHAMKRGILTSHAAGNDGPRPSTITNYSPWLLSVAATTIDRKFMLGTAAKPLSVAFLLHQTLKVSCLVPLE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01546 348 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 244 321 IPR045051 -
Cca05g01546 348 SUPERFAMILY Subtilisin-like 32 319 IPR036852 GO:0004252|GO:0006508
Cca05g01546 348 Gene3D Peptidase S8/S53 domain 245 316 IPR036852 GO:0004252|GO:0006508
Cca05g01546 348 Gene3D Peptidase S8/S53 domain 147 244 IPR036852 GO:0004252|GO:0006508
Cca05g01546 348 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 125 IPR037045 -
Cca05g01546 348 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 244 IPR045051 -
Cca05g01546 348 PANTHER PUTATIVE-RELATED 244 321 - -
Cca05g01546 348 PANTHER PUTATIVE-RELATED 33 244 - -
Cca05g01546 348 Pfam Subtilase family 146 314 IPR000209 GO:0006508|GO:0008236
Cca05g01546 348 ProSiteProfiles Serine proteases, subtilase domain profile. 129 348 - -
Cca05g01546 348 Pfam Peptidase inhibitor I9 45 125 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01546 Cca-Chr5 34602473 34606677 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01546 21 321 Subtilisin-like Serine Gene Family AT5G59130 48.494 1.31e-91 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01546 - - gmx:100787973 442.195