Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01540 ATGGAAAATAGATCCTCAACTCTTCTTTTGCTTCTCCTCCTATGTTTTACTTCACTAGTGCTGAAATGTCACTCAAATTCACCAGATGACCTGAAGACTTACATAGTCTACACTGGCAACAGAATGAACGATAAAGTTTCTTCATTGTCCCTTTACAAAAACATGCTACAAGAAGTTGCAGACAGCAATGCTGCACCTAAGACTGTACTGCACCACTACAAGCGTAGTTTCAGTGGCTTTGTTGTGAAGCTAACAAAGGAAGAAGCTGATAGAATGGCTGCACTTGATGGAGTGGTGTCTGTCTTTCCTAATGAAAAGAAACAACTACACACGACAAAGTCTTGGGATTTTATTGGCTTTCCACAAAACGTGGAAAGAAGAAACACTGAAAGTGACATCATTATTGGACTAGTTGACTCTGGAATCTGGCCCGAATCCGAGAGTTTCAATGACAAAGGGTTCGGTCCACCACCTAGTAAATGGAAGGGCACTTGCCAAGCCTATAATTTCACTTGCAACAATAAAATAATTGGTGCCAAGTACTATAGAATTGATGTGGATGATACTGACAGGTTCAAGAGTGAAAAACATCTCCAATATTCTCCAAGAGACACACAGGGTCATGGGACTCATACAGCATCAACAGCAGCTGGGAACACAGTTAGCAGGGCAAGCATGTTAGGCCTTGGAGAAGGAACATCAAGAGGTGGTGCCACGTCAGCACGCATTGCTGTCTATAAAGTGTGTTGGGAAGGTGGATGTGATACTGCAGCCATTCTTGCTGCATTTGATGATGCAATTGCCGATGGTGTGGACATATTGTCACTGTCACTTGGAGGAGACAATGATATGAACTATTTTTCAGATGAACTTTCCATTGGAGCATTCCATGCCATGAAAAATGGCATACTGGCAGTATTTTCAGCAGGGAACAGTGGTCCAATTCCTGCAACCGTAACGAATTTAGCACCTTGGTCAATTGCAGTGGCTGCTAGCACCATAGACAGGAAGTTTGTTACCAGGGTTGAATTAGGAGACAACAGAACTTTTGAGGGAATCTCGGTAAATACATTTGACCTTAAGGGAGAATTCTACCCTATAATCTTTGGTGGAGATGCACCAAATACTAAAGCAGGCATGGATGAATCTTCATCCAGGTATTACTCATTCAATTCATTGGATTCAAATTTGATGAAGGGTAAAATTGTTCTCTGCGAGGGAGGAAGCATTGATATGTCCGGGTCAGCCACCCTCAACGCTGGTGCTGTTGGTTTCCTGTCACAGGGTCAAAGTGGAAGAGATGTTCCAATCACTTGTGGCTTGCCTGGGTCTTACCTTGATTTGAAGGATGGTGCCAGTGTATACGACTACATAAAATCTACAAGGGATCCCATTGCAACCATATTTAAGAGCAATGAGATAAAAGATACTTTGGCCCCCAAGGTAGCCTCTTTCTCATCAAGGGGTCCAAATTTAATTACACCTGAAATTCTCAAGCCGGATTTGATAGCTCCTGGAGTTGACATTGTGGCTAGTTGGTCTCCACTTGGCTCTGCTACTGGAACTCTTGGAGACGAAAGAAAATTAGAGTTCAATATTATCTCAGGAACATCAATGTCTTGTCCCCACGTGTCAGGTGCAGCAGGGTATGTCAAATCATTTCATCCTACTTGGTCTCCTGCTGCTATCCGTTCAGCTCTAATGACAACAGCTAAGCCTATGAGAGCCAATAATAACCGTGATGCTGAATTCGCATATGGAGCAGGGCAAATTGATCCTTCCAAGGCTTTGAAACCCGGTCTGGTGTATGATGCTGGTGAAAGTGACTATGTAAGATTTTTATGTGGACAAGGGTATAGTTCAAAGATGTTACAACTCATCACAGGGGATAGCAGCTGTTGTTCTTCTGAGACAACTTATGGAACAGCAAGGGATCTAAACTACCCTTCATTTGCTCTTCAAGCCACACACGGCAAGCCCAATGTAAGTGGCAGTTTCTACAGGACATACACAAATGTAGGGTCACCAACGTCCACATATAAAGCCATTGTGACTGCTCCTAGAGGACTTAAAATCCAAGTTAAGCCGAGTGTTTTGCCATTCACTTCTATTGGCCAAAAGAGAACGTTTGTGCTTAGTATCAATGGATCAATAGACGCAGCTATTGTGTCAGGTTCTTTGGTTTGGGATGATGGTGAATTCCAAGTGAGGAGTCCCATTGTTGTGTTTGATGTACCAATACCATAG 2247 0.4299 MENRSSTLLLLLLLCFTSLVLKCHSNSPDDLKTYIVYTGNRMNDKVSSLSLYKNMLQEVADSNAAPKTVLHHYKRSFSGFVVKLTKEEADRMAALDGVVSVFPNEKKQLHTTKSWDFIGFPQNVERRNTESDIIIGLVDSGIWPESESFNDKGFGPPPSKWKGTCQAYNFTCNNKIIGAKYYRIDVDDTDRFKSEKHLQYSPRDTQGHGTHTASTAAGNTVSRASMLGLGEGTSRGGATSARIAVYKVCWEGGCDTAAILAAFDDAIADGVDILSLSLGGDNDMNYFSDELSIGAFHAMKNGILAVFSAGNSGPIPATVTNLAPWSIAVAASTIDRKFVTRVELGDNRTFEGISVNTFDLKGEFYPIIFGGDAPNTKAGMDESSSRYYSFNSLDSNLMKGKIVLCEGGSIDMSGSATLNAGAVGFLSQGQSGRDVPITCGLPGSYLDLKDGASVYDYIKSTRDPIATIFKSNEIKDTLAPKVASFSSRGPNLITPEILKPDLIAPGVDIVASWSPLGSATGTLGDERKLEFNIISGTSMSCPHVSGAAGYVKSFHPTWSPAAIRSALMTTAKPMRANNNRDAEFAYGAGQIDPSKALKPGLVYDAGESDYVRFLCGQGYSSKMLQLITGDSSCCSSETTYGTARDLNYPSFALQATHGKPNVSGSFYRTYTNVGSPTSTYKAIVTAPRGLKIQVKPSVLPFTSIGQKRTFVLSINGSIDAAIVSGSLVWDDGEFQVRSPIVVFDVPIP 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01540 748 Pfam Subtilase family 131 589 IPR000209 GO:0006508|GO:0008236
Cca05g01540 748 ProSiteProfiles Serine proteases, subtilase domain profile. 114 597 - -
Cca05g01540 748 Gene3D - 614 744 - -
Cca05g01540 748 CDD PA_subtilisin_like 342 468 - -
Cca05g01540 748 SUPERFAMILY Subtilisin-like 109 601 IPR036852 GO:0004252|GO:0006508
Cca05g01540 748 CDD Peptidases_S8_3 107 571 IPR034197 -
Cca05g01540 748 ProSitePatterns Serine proteases, subtilase family, serine active site. 536 546 IPR023828 -
Cca05g01540 748 Gene3D Peptidase S8/S53 domain 132 610 IPR036852 GO:0004252|GO:0006508
Cca05g01540 748 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Cca05g01540 748 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Cca05g01540 748 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Cca05g01540 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 744 IPR045051 -
Cca05g01540 748 PANTHER PUTATIVE-RELATED 22 744 - -
Cca05g01540 748 Gene3D - 335 475 - -
Cca05g01540 748 Pfam Peptidase inhibitor I9 33 110 IPR010259 -
Cca05g01540 748 Pfam Fibronectin type-III domain 645 742 IPR041469 -
Cca05g01540 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 110 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01540 Cca-Chr5 34566633 34570849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01540 11 743 Subtilisin-like Serine Gene Family AT3G46840 48.396 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01540 - - gmx:100784447 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01540 05 34566633 34570849 Cca05g01540 05 34566633 34570849 ECH
Cca05g01540 05 34566633 34570849 Cca01g00353 01 4049884 4055251 PCT