Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01463 ATGATGAGTTTATGTTCCTCTCAAGGAACAAGTTCTGATGACACCAAGGATGTTCCCAATGCACTTGGAAAAGACTCTTCTGAGTTAAAAAGGCACAAACTCAGAACCTTTTTGAAAAAAATAATGTGGGACTTTGCCCTTGCTTGTGTTGGTGTTACTTGTGGTGGCAATAACTACCGTAACGGTCTCAGGAAGACCACTTTGGAGCATAACAAGGCGTGGCTGCTGTCAGAATCTGGAGCAGAATTGGCAAGTGCTGACCCTCAATCGGTTCACTCATCTTTCAGGTTTAGCTTCTGTTCTCAGGTTGAAGTTGAGTCCTTCAACATGAGTTctactctttctgctgctactactactgctactacCATTTTGACGGTGAATTTGGAATATGAGTCTCAAGTGAGGGAGATGAAGTGGAGGAGAATAGAGTCACTGGAGAAAAGCATATCCCCAGTGGTCAACACTTTGATCAGGTTCAGCTATGATGAAATTCTATTTGCTACTCACAATTTCTCCCAAGGGAGGGTGTTGGGGAGAGGTGCCTTGAGCTGTGTTTTTAGAGGAAGAGTTGGGCCTTGGAAGACTGCTGTTGCTATTAAAAGGTTGGATAAAGAAGACAAAGAGAGTGCCAAGGCGTTTTGTAGGGAATTGATGATTGCTAGTTCTCTTCATAACACAAACGTTGTTCCCCTTGTGGGATTTTGTATTGACTCAGAAGAGGGTTTGTTTTTGGTGTACAAGTATGTGTCTGGGGGAAGCTTAGAGCACCACTTACATGGTAGGAAGAAGAGTGTGAAGGGTGGTTCATCACTTCCATGGTCTGTGAGGTATAAAGTTGCAATTGGGATTGCAGACGCCGTGGCTTATCTGCATAATGGAACAGAAAGATGTGTTGTTCATAGAGACATTAAGCCTTTAAACATTCTGCTTTCCTCTAAGAAGATTCCCAAGTTATGTGATTTTGGATTAGCTACATGGACTGCTGCACCTTCAGTTCCATTCCTTTGCAAAGCTGTGAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGATAAAACTGATGTTTATGCTTTGGGAGTTGTTTTATTGGAACTCTTAACTGGCCGCAAGCCAATTGAAGCAAAAAGGCCTCATGGAGAGGAAAACTTGGTCTCATGGGCTAAACCTTTGCTGAGAAAAGGGAAAGGAGCCATTGAGGAGTTGCTTGATCCTCAAGTGAAGTACAGTTTGAGATACACAGATCAAATGGCTAGGATGGTTGATGCAGCAGCTGCTTGTGTTACAAATGAAGAATCTAGGAGACCTAGCATAGGTGAGATTGTTGCAATACTGAAGGGTGAGGTAGAGCCTGTTTTCTCTAGAAGAAGGAAATCTGGTTATTTTGGTAATGGATATGTGATTGATTACTACCCTCAATTACAAGAAACAAATAATGAGATGAAAAGTCACTTGGCTTTGGCAATGCAAGGAGTTCCAGAGTATGATGAAGATGATTTTCTTTGTGGTCGTTGA 1536 0.4115 MMSLCSSQGTSSDDTKDVPNALGKDSSELKRHKLRTFLKKIMWDFALACVGVTCGGNNYRNGLRKTTLEHNKAWLLSESGAELASADPQSVHSSFRFSFCSQVEVESFNMSSTLSAATTTATTILTVNLEYESQVREMKWRRIESLEKSISPVVNTLIRFSYDEILFATHNFSQGRVLGRGALSCVFRGRVGPWKTAVAIKRLDKEDKESAKAFCRELMIASSLHNTNVVPLVGFCIDSEEGLFLVYKYVSGGSLEHHLHGRKKSVKGGSSLPWSVRYKVAIGIADAVAYLHNGTERCVVHRDIKPLNILLSSKKIPKLCDFGLATWTAAPSVPFLCKAVKGTFGYLAPEYFQHGKVSDKTDVYALGVVLLELLTGRKPIEAKRPHGEENLVSWAKPLLRKGKGAIEELLDPQVKYSLRYTDQMARMVDAAAACVTNEESRRPSIGEIVAILKGEVEPVFSRRRKSGYFGNGYVIDYYPQLQETNNEMKSHLALAMQGVPEYDEDDFLCGR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01463 511 SUPERFAMILY Protein kinase-like (PK-like) 152 452 IPR011009 -
Cca05g01463 511 MobiDBLite consensus disorder prediction 1 17 - -
Cca05g01463 511 Pfam Protein kinase domain 173 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g01463 511 PANTHER OS01G0750732 PROTEIN 21 508 - -
Cca05g01463 511 ProSiteProfiles Protein kinase domain profile. 172 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g01463 511 MobiDBLite consensus disorder prediction 1 23 - -
Cca05g01463 511 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 21 508 - -
Cca05g01463 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
Cca05g01463 511 SMART serkin_6 172 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g01463 511 Gene3D Transferase(Phosphotransferase) domain 1 250 463 - -
Cca05g01463 511 Gene3D Phosphorylase Kinase; domain 1 143 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01463 Cca-Chr5 33396940 33400145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01463 160 455 Trihelix Transcription Factor Family AT1G70460 41.611 1.52e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Cca05g01463 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01463 - - gmx:100820245 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00426 01 5150290 5153826 Cca05g01463 05 33396940 33400145 PCT