Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01444 ATGAAAGATGTCGAATCGGGAAGAGGAGGAGGCTACACCGGCCCCTCTTCGTCGTCCACCACCTGCTCTGTCGGGGGCAGATGGGGCGGCGGAGGTGGTGGTTGCCTCTGTGCAATTAGAGCCTTGTACAATGCTCGGATGAGTATAGCGCTACCACCATCCCCACCAGGACCACGGCGAAGATCCGAGACCAACACTGAAAGCAGCTCAGACATATTCCTAACTAACATAATGGATAAATTTTCGAGCAATGTGGGAAGTGAAAAGCCAATCAGGTATACTGCTAAGCAGCTCAGGATTGCAACTGATAACTACTCTACCTTGTTGGGTTCAGGAGGTTTTGGACAAGTTTATAAAGGAAATTTAAGTGATGGAACCACTGTGGCTGTGAAGGTTCTACGCGCGAACTCAGATAAGAGAATACAGGAACAGTTAATGGCAAAAGTGAGTACAATTGGAAAAATCCATCATTTCAATCTAGTTCAGTTCTATGGATTTTGCTTTAAGAAAGATCTGAGAGCACTGGTTTATGAATACATGGGGAATGGCTCTCTTGACAAGTATCTGTTTCATGAAAACAAGACCCTAAAATATGAAAAGCTTCATGACATTGCAGTTGGAACAGCAAGAGGCATTGCATACTTGCATGAAGATTGTCAACAAAGAATAATCCACTATGACACCAAACCAGAAAATATTCTCTTGGACAGCAACTTCAATCCTAAAGTTGCTGATTTTGGAATGGCTAAGCTTTGCAATAGGGAAATATCTCATATAACTATGACTGGAGGTAGGGGCACTCCTGGTTATGTTGCCCCTGAGATTTGGATGCCACTTCCTGTAACTCACAAGTGTGATGTTTACAGCTTTGGAATGTTATTATTTGAAATCGCGGGAATGAGAAGAAACTTGGACATTAACCTTCCAGAAAGCCAGAAGTGGTTCCCAATATAG 954 0.4329 MKDVESGRGGGYTGPSSSSTTCSVGGRWGGGGGGCLCAIRALYNARMSIALPPSPPGPRRRSETNTESSSDIFLTNIMDKFSSNVGSEKPIRYTAKQLRIATDNYSTLLGSGGFGQVYKGNLSDGTTVAVKVLRANSDKRIQEQLMAKVSTIGKIHHFNLVQFYGFCFKKDLRALVYEYMGNGSLDKYLFHENKTLKYEKLHDIAVGTARGIAYLHEDCQQRIIHYDTKPENILLDSNFNPKVADFGMAKLCNREISHITMTGGRGTPGYVAPEIWMPLPVTHKCDVYSFGMLLFEIAGMRRNLDINLPESQKWFPI 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01444 317 Gene3D Transferase(Phosphotransferase) domain 1 180 315 - -
Cca05g01444 317 ProSiteProfiles Protein kinase domain profile. 103 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g01444 317 MobiDBLite consensus disorder prediction 1 22 - -
Cca05g01444 317 PANTHER RUST RESISTANCE KINASE LR10-RELATED 58 316 IPR045874 GO:0004672
Cca05g01444 317 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Cca05g01444 317 SUPERFAMILY Protein kinase-like (PK-like) 78 305 IPR011009 -
Cca05g01444 317 Pfam Protein tyrosine and serine/threonine kinase 107 298 IPR001245 GO:0004672|GO:0006468
Cca05g01444 317 MobiDBLite consensus disorder prediction 50 69 - -
Cca05g01444 317 Gene3D Phosphorylase Kinase; domain 1 75 179 - -
Cca05g01444 317 PANTHER PUTATIVE-RELATED 58 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01444 Cca-Chr5 33157400 33161605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01444 92 301 Receptor kinase-like Gene Family AT5G38280 45.327 4.41e-61 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Cca05g01444 PK_Tyr_Ser-Thr 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01444 - - gmx:100776445 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01444 05 33157400 33161605 Cca05g01444 05 33157400 33161605 ECH