Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01427 ATGAAGAAGAACGGAGACATGGATACTACTGTCAAGAAAAAGGCATTGCCTACGTCTCGTGCTAGCTTGAGTCCCCAGAGGAAAGACAAATGCATAGTGTTTCCCCTTGTGAGGTACAATGAATTACGTCAGCCTGTTTGTCAGGTTTGTAATGTGGTTATGGTGGAGGCTATACGTGCACACCTAACTTCTCCTGAGCATATCCAGATAATGGAAAATTTGAAGGCTAACACTGCAAGATCAACTGTGCTTAACAATGCAAAGCATGTTAATGGCACCAACTTGCCCAAGGCAAATCCAGAACAACCTCAAGTCACAGAAGGTCAACTGCCTGAATGTCCACAAGATGTGCCTAAACATCAGTCACCAGCAATGCTTCCACGAGATTTTTGTGATGACAGTGGTAAAATAAGAACAAGATCTGTTTCAAAAGTAACTGAAGAGATGGGTCTTCCTAAAGGACCAGAGCACTGGGAATCCATCGACTCCACAAGAATGAAATCCAAAGATTTTCCTTCCACAGGTGAAGTTTTGGGATCTTCAAAACGAGGAAGACCACGAAAAACAAAGCCTACCAAGTTCATAAGCAACCAAACATCCAATCCCTCATCAACACCCCGAAGATCTAAAAGAATAAAACATGTGGCGGATAAAACTGCCAAAAATATGCCTGAGGTATCTTCATCTGAGGATGTAATGAAGGTAAAATTAATAACATTACTAAAGGAGCGTGCTGCAGAAAATTCACAAGTAGATGGCAAAGAAGTCTCTTCAGATATTGACTTTTTAGTAATCTACAAAAGAAAAAGACTACCTCGAAAGAGGGCTTCAGTATCTCCCCCTCATCAAGATCCTCCTGCAGCTGCTCCAGCCAATGTTGATACTCCTCTTGTTGAATATACAAATACTGCTGAGCAAGTATTGAGTAAAAGCCTTGTCGAAGAGGCCAAGAAGGTGAACCCTGCTCCAGACAATTCTCAAGAACAGGTTGTTTACAGCAAGGATCAAGAATCCCCAGATCAAGTTGACCCAAAGACTGATGAAGTCTCTAATGTAAACACCCCACTTGATGTAGAAGCCATTAACAAGATGATCGAAGATGACCCTTTGAGTGCTATTGAAAATATTCTGACAGGAAAGATTTCCATTTCTTCCAAGACTCCTCAATCTACTTCTCGGTTAGAACGACCAAAAGGTCAAAGCACCTCTGCAGATGTTCTGGCAAAAGAGCTAAAATACTTAATCCAGACCTTTAGCTTAGGTGATTTTATTACAGACTATGAACAAATGTCAAAGGTCCTACTTATTCTTGAAGAGTTGCAGAAGAATGAGAAGTCTCTTTCTCTTGCCCAGCAAGCATTTATAAAGGCCTTCAGACTCTTCATCAAGAAAGCTGTTACCCACCGCAAAGAATGCTATATAGCTGGAGTGAAGAAAGTCGAGTTGAACAGAGCTAAAGAAGATATCCTTCTCAAACTCCAAGAAACTAAAAATACACAGGAACAAATCACTACGTCTATTTTTAATGCCAACAACAGGGTCATTGAAATATCTTCTTGTATTGAACAACTTGAAGAACAATTATCCAAACTGAAGGAGGAGAGGGAGACCTTTCAGTTGGCTATTAATGAAGGCGAGAAACAAAGGGAGACATTAAAGAATGATAGCATCGTATGGGCTCATCAAGCTAAAGACCTGGTTTTTGATCTCGCAGAGATTGAGGCCAAAGTAAAAATTCTTGGAGAGCAACATGAAGCAGACAAAGATGCATATGTCCAATTTAGAGCATCCTTTCCTTTTTAA 1803 0.4049 MKKNGDMDTTVKKKALPTSRASLSPQRKDKCIVFPLVRYNELRQPVCQVCNVVMVEAIRAHLTSPEHIQIMENLKANTARSTVLNNAKHVNGTNLPKANPEQPQVTEGQLPECPQDVPKHQSPAMLPRDFCDDSGKIRTRSVSKVTEEMGLPKGPEHWESIDSTRMKSKDFPSTGEVLGSSKRGRPRKTKPTKFISNQTSNPSSTPRRSKRIKHVADKTAKNMPEVSSSEDVMKVKLITLLKERAAENSQVDGKEVSSDIDFLVIYKRKRLPRKRASVSPPHQDPPAAAPANVDTPLVEYTNTAEQVLSKSLVEEAKKVNPAPDNSQEQVVYSKDQESPDQVDPKTDEVSNVNTPLDVEAINKMIEDDPLSAIENILTGKISISSKTPQSTSRLERPKGQSTSADVLAKELKYLIQTFSLGDFITDYEQMSKVLLILEELQKNEKSLSLAQQAFIKAFRLFIKKAVTHRKECYIAGVKKVELNRAKEDILLKLQETKNTQEQITTSIFNANNRVIEISSCIEQLEEQLSKLKEERETFQLAINEGEKQRETLKNDSIVWAHQAKDLVFDLAEIEAKVKILGEQHEADKDAYVQFRASFPF 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01427 600 MobiDBLite consensus disorder prediction 191 206 - -
Cca05g01427 600 MobiDBLite consensus disorder prediction 89 109 - -
Cca05g01427 600 MobiDBLite consensus disorder prediction 322 336 - -
Cca05g01427 600 MobiDBLite consensus disorder prediction 150 166 - -
Cca05g01427 600 Coils Coil 514 555 - -
Cca05g01427 600 PANTHER UNCHARACTERIZED 7 599 IPR040050 GO:0003676|GO:0005681|GO:0008270
Cca05g01427 600 MobiDBLite consensus disorder prediction 1 22 - -
Cca05g01427 600 MobiDBLite consensus disorder prediction 273 293 - -
Cca05g01427 600 MobiDBLite consensus disorder prediction 89 227 - -
Cca05g01427 600 MobiDBLite consensus disorder prediction 318 350 - -
Cca05g01427 600 Coils Coil 479 499 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01427 7 79 C2H2 Transcription Factor Family AT3G02860 46.667 9.69e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01427 - K13104 gmx:100815983 842.802