Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01423 ATGGTGAGTGCTTCATCCCCCACACAAGTGAACAAGGATGAACAAGAGGTTCAACGCAAAATCCATAAGCCAAGATGGCTTGAGGGTTTTCTCACAAAAACTTTCTTTGACTCATGTCCAACTCATCCATTTCGTAGGAATGAGTTGAACAAGTATTGCATAAATTGTAATATGTCAGCTTGCCAGTATTGTTTTTCATCAGGTCCTCATCGCCATCACAAGATACTTAAAATCTATAGGCATGTTTACAAGGATGTTGTCTCCCTTTCAGCTATGGAAAAGTATATTGACAGCTCACAAATTCAGCCTTACAAGTGCAACAAGCGACTAGTTATTTCTCTGAATCCTCTCCCACATTGTGGTTCAGCAATAAATAATGAGGCATCATGCAATACCTGCAACCGAAAATTGTCTGATCCCGATTTATATCGCTACTGCTCCATTACTTGCAAGGTCAAAGCTGTTTTAAGTAAGCCTAATGATTCAGATCCTCCTTTCATTTCCATTCAAAGTATTCCTCCTCCTCAGGAAAACCAAGAGGGAGGTTCTGAACCCCAAAGTCAAAAGAAGAAAAGAAAGGGAATACCTCAAAGAGCTCCTTTCTTCTAA 609 0.399 MVSASSPTQVNKDEQEVQRKIHKPRWLEGFLTKTFFDSCPTHPFRRNELNKYCINCNMSACQYCFSSGPHRHHKILKIYRHVYKDVVSLSAMEKYIDSSQIQPYKCNKRLVISLNPLPHCGSAINNEASCNTCNRKLSDPDLYRYCSITCKVKAVLSKPNDSDPPFISIQSIPPPQENQEGGSEPQSQKKKRKGIPQRAPFF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01423 202 MobiDBLite consensus disorder prediction 163 183 - -
Cca05g01423 202 SUPERFAMILY B-box zinc-binding domain 38 81 - -
Cca05g01423 202 CDD Bbox2 39 78 - -
Cca05g01423 202 Pfam B-box zinc finger 38 78 IPR000315 GO:0008270
Cca05g01423 202 MobiDBLite consensus disorder prediction 160 202 - -
Cca05g01423 202 Pfam PLATZ transcription factor 80 152 IPR006734 -
Cca05g01423 202 Gene3D Classic Zinc Finger 33 107 - -
Cca05g01423 202 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 5 202 - -
Cca05g01423 202 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 202 - -
Cca05g01423 202 ProSiteProfiles Zinc finger B-box type profile. 39 78 IPR000315 GO:0008270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Cca05g01423 PLATZ 3.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01423 - - zju:107416213 257.684