Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01404 ATGGTTCTTTCGAAACCTGCCTCTCAGACAGATGTCTCTGTCCATTCAACCTTCGCCTCTCGCTATGTCCGCGCCTCCCTCCCCAGGTTCAAGATGCCGGAACAATCGATTCCGAAGGAAGCGGCGTACCAGATCATAAACGACGAGCTGATGCTTGACGGGAACCCTCGGCTGAACCTGGCCTCCTTTGTGACGACGTGGATGGAGCCTGAATGCGACAAACTCATCATGGCTGCCATCAACAAAAACTACGTCGACATGGATGAGTACCCTGTCACCACTGAGCTCCAGGATTGTGTTAACGAGGGACTTGAATAA 318 0.5252 MVLSKPASQTDVSVHSTFASRYVRASLPRFKMPEQSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQDCVNEGLE 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01404 105 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 99 IPR002129 GO:0016830|GO:0019752|GO:0030170
Cca05g01404 105 PANTHER GLUTAMATE DECARBOXYLASE 1 101 - -
Cca05g01404 105 Gene3D - 1 65 - -
Cca05g01404 105 SUPERFAMILY PLP-dependent transferases 15 97 IPR015424 -
Cca05g01404 105 PANTHER GLUTAMATE DECARBOXYLASE 1 101 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01404 Cca-Chr5 32453541 32454615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01404 1 101 Calmodulin-binding Proteins AT5G17330 89.216 5.11e-61 192