Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01394 ATGAATGATTCTTTGGTGGATGAATACTCTTTGGGCCAAAATGCATTTACTAGATCACGGGGTGGTCTTCCAGTTGGAGATGGAATATCTTTGAATTCTGATATATATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATCAATTTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTGATTGGAGTTATATCGAGTTCGTTGATAATCAAGATGTTCTTGATCTCATAGAGAAGGTATAA 300 0.35 MNDSLVDEYSLGQNAFTRSRGGLPVGDGISLNSDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKV 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01394 99 Gene3D - 41 98 - -
Cca05g01394 99 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 98 IPR027417 -
Cca05g01394 99 PANTHER MYOSIN-7 33 98 - -
Cca05g01394 99 Pfam Myosin head (motor domain) 34 98 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cca05g01394 99 ProSiteProfiles Myosin motor domain profile. 1 99 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cca05g01394 99 PRINTS Myosin heavy chain signature 29 57 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cca05g01394 99 PRINTS Myosin heavy chain signature 82 99 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cca05g01394 99 PANTHER MYOSIN 33 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01394 Cca-Chr5 32296316 32297187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01394 3 98 Myosins gene family AT1G08730 75.510 9.75e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01394 K10357 - ccaj:114916892 149.443