Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01370 ATGATCCCTGTGATCCAGAACAAGTTGTGCGATGAAGCTACTAGTGCTCTTGACAGCACAACAGAAGCAGAGATTTTAAGTGCGTTAAAGTCAGTAGCACGTAATCGGACTTCCATATTCATTGCTCACAGGCTTACCACTGCAATGCAGTGTGACGAGATCATTGTTTTGGAGAATGGGAAGGTGGTTGAGCAAGGACCCCATGAAGTGCTCTTATCAAAAGCAGGAAGATATGCACAGCTGTGGGGACAGCAAAATAACACGATTGATGCAATTGATACAGCCATCAAGCTGGGTGCATAA 303 0.4488 MIPVIQNKLCDEATSALDSTTEAEILSALKSVARNRTSIFIAHRLTTAMQCDEIIVLENGKVVEQGPHEVLLSKAGRYAQLWGQQNNTIDAIDTAIKLGA 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01370 100 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 9 91 IPR039421 -
Cca05g01370 100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 85 IPR027417 -
Cca05g01370 100 Gene3D - 6 97 IPR027417 -
Cca05g01370 100 PANTHER BNAA10G12020D PROTEIN 9 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01370 Cca-Chr5 31946601 31947336 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01370 9 81 Calmodulin-binding Proteins AT2G36910 48.000 1.75e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01370 K05662 - ccaj:109817710 181.8