Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01362 ATGTATTGCAAGAGAGAGCACAAGGAAGATGGAAAGGGAGAGCATGGTTATGTGGAAACCGACCCAACTGGTCGCTATGGCAGGTTTGGAGATGTTCTTGGAAAAGGAGCAATGAAGACAGTGTACAAAGCAATTGATGAAGTTCTTGGAATTGAGGTAGCATGGAATCAGGTCAGACTCAATGAGGCACTTCGCACACCGGACGATTTGCAGCGGCTTTACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCACCAGTCCATCATAAGATTCTACACTTCTTGGATTGATGTTGATAACAAGGCCTTCAACTTTGTCACAGAATTGTTCACATCAGGGTCACTGAGAGAATACAGGAAGAAATATAAGCGGGTAAGCATACAAGCTATAAAACATTGGGCACGCCAAATCTTGCAAGGTCTTGTTTATCTACATTGCCATGATCCACCTGTGATCCATAGGGACCTCAAATGTGATAACATATTTGTCAATGGTCATCTTGGACAAGTAAAAATTGGTGACCTGGGACTGGCTGCAATTCTCCGTGGTTCCCAATCAGCACACAGTGTCATAGGCACACCCGAGTTTATGGCACCAGAATTGTACGAGGAAGAATACAATGAACTAGCTGATGTATACTCATTTGGCATGTGTGTGTTGGAAATGCTTACATCTGAATATCCATATAGTGAATGTTCTAATCCAGCACAAATCTACAAGAAAGTGACATCGGGGAAACTACCATTGGCTTTTTTCCGGATTGAAGACATGGAAGCACAAATGTTTATTGGAAAATGCTTACTACCTGCAGCAAATAGACCATCTGCTAAAGAATTGTTGCTTGACCCTTTTCTTGTGTCTGATGATTCAACATCCACGATTAAGTTTGCAATTCAGAAGCCATTTTTGAATGCCAGTGAGATGGAGAAACTGCAATTAAGTGATAATCTTCCTAGGACTGGAATGAAAGTGATAGGGAAGCTGAATCCTGAAGATGATACTATCTTTCTCAAAGTGCAAATTTCTGACAAGGATGGTTCAGTTAGGAATGTATTCTTTCCCTTTGACATTTTCAATGACACCCCTATTGATGTTGCAACTGAGATGGTGAAAGAATTGGAGATTGCTGATTGGGAGCCTTTTGAGATTGCAAATATGATTGATAGAGAGATATCTGCACTGCTACCTCACAGGAGGGAAAGTGACACATTCAGTTATCTAGATGATGATGATGGACCTCATCATCATTTCCGCTCCTTCTCTTCTAGTTCATCATTCAAAGAATCAATGTCAGATTTAGTCAGCAAAGCTGAGGAAATATCAAGTGGATATTATTGGCTCCATGATGAATTGCATGATGATACTAGTTCACAATGTTCTTCACAAGGGACATATTCCAACTTGAATTACTATTCTGTGGATGATCAAGAGTACAACGTGTCTTCTAGAAAAGATAATAAACTTCCAATCATAAAGAGTCACAAGGGCAAAATGGTTTCCCCAGGCGAAGACTTCAGCAATTTCAGCCAGTGTAAAGGCATGGTTGGATCACACATTCCTTTTACTTGTAAAAGTAAGATGACGACAAAAAATCACAGATTAACAAGGAACAGATCCTTAATTGATTTACGGAGCCAGCTATTACATCGATCTCTGGTTGAAGAGATAAACAAAAGAAGATTATTCAAGACAGTTGGTGCTGTGGAAAATATTGGATTTCAGGCACCTTGTGATGTTACCACAAAAAGGTCACAACCTGCATGTGCTGCTTCAAATGAGAACTCTCAAAGGAGTGGCAAGGGAGAAAAAATTAAGAGATAA 1821 0.4025 MYCKREHKEDGKGEHGYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEALRTPDDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVDNKAFNFVTELFTSGSLREYRKKYKRVSIQAIKHWARQILQGLVYLHCHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPLAFFRIEDMEAQMFIGKCLLPAANRPSAKELLLDPFLVSDDSTSTIKFAIQKPFLNASEMEKLQLSDNLPRTGMKVIGKLNPEDDTIFLKVQISDKDGSVRNVFFPFDIFNDTPIDVATEMVKELEIADWEPFEIANMIDREISALLPHRRESDTFSYLDDDDGPHHHFRSFSSSSSFKESMSDLVSKAEEISSGYYWLHDELHDDTSSQCSSQGTYSNLNYYSVDDQEYNVSSRKDNKLPIIKSHKGKMVSPGEDFSNFSQCKGMVGSHIPFTCKSKMTTKNHRLTRNRSLIDLRSQLLHRSLVEEINKRRLFKTVGAVENIGFQAPCDVTTKRSQPACAASNENSQRSGKGEKIKR 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01362 606 SUPERFAMILY Protein kinase-like (PK-like) 28 308 IPR011009 -
Cca05g01362 606 Gene3D Phosphorylase Kinase; domain 1 12 108 - -
Cca05g01362 606 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g01362 606 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 600 - -
Cca05g01362 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Cca05g01362 606 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 5 600 - -
Cca05g01362 606 CDD STKc_WNK 25 285 - -
Cca05g01362 606 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca05g01362 606 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Cca05g01362 606 MobiDBLite consensus disorder prediction 584 606 - -
Cca05g01362 606 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01362 Cca-Chr5 31780633 31785417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01362 17 582 MAP Kinase Kinase Kinase AT5G58350 60.908 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Cca05g01362 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01362 K08867 - gmx:100272203 1004.59