Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01355 ATGGCGGATGAAACTCATAATGAGGTGAAGGAGGAGGTTCCAGAAATTGCACCATTTGATCCTACCaagaagaagaagaagaagaaAATTACAATTGTGGATCCTGCTGATGACCCAGTCGAAAAATTGGCTGAGAAGACAGAAAACCTCTCAGTTGCTGATGGAGTTGAGACTGCATTTACTGGTTTgaaaaagaagaagaagaagCCTGTTGAAATCAGTAACTTGAATGATGAGAGTGGAGATGCCATTGAAGATTTGGATGATCACGCTGAAGATGATGAAGGAGAAACAGTTGCTCCCCAGGCTCGTTATCCTTGGGAAGGGAGTGATCGTGATTATGAATACGAGGAGCTTCTTGGCAGGGTGTTTAACATTCTACGTGAGAATAATCCTGAACTTGCTGGAGATCGGCGGAGGACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAGGGCACAAAGAAAACTGTGTTCGTGAATTTTATGGATCTGTGCAAAACAATGCATCGGCAGCCAGACCATGTCATGGCTTTCTTGCTTGCTGAGCTGGGTACAAGTGGCTCCCTTGATGGTCAGCAGAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATGTCAATGAATATGTCATTTGCCTTGGATGTAAGAGTCCGGACACTATACTTACCAAGGAAAATCGTCTCTTCTTCCTCCGGTGTGAGAAGTGTGGATCAGGAAGATCTGTTGCTCCAATCAAGGCTGGATTTGTTGCTCGTGTTGGCAGAAGGAACACGGGGACATGA 807 0.4337 MADETHNEVKEEVPEIAPFDPTKKKKKKKITIVDPADDPVEKLAEKTENLSVADGVETAFTGLKKKKKKPVEISNLNDESGDAIEDLDDHAEDDEGETVAPQARYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCKSPDTILTKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01355 268 SMART eIF2Bneu4 138 247 IPR002735 GO:0003743|GO:0006413
Cca05g01355 268 MobiDBLite consensus disorder prediction 1 30 - -
Cca05g01355 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 266 IPR045196 GO:0003743|GO:0006413
Cca05g01355 268 Gene3D - 111 253 - -
Cca05g01355 268 PANTHER BNAA02G05130D PROTEIN 1 266 - -
Cca05g01355 268 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 217 252 IPR016190 GO:0003743|GO:0006413
Cca05g01355 268 MobiDBLite consensus disorder prediction 79 95 - -
Cca05g01355 268 MobiDBLite consensus disorder prediction 1 22 - -
Cca05g01355 268 Pfam Domain found in IF2B/IF5 137 246 IPR002735 GO:0003743|GO:0006413
Cca05g01355 268 MobiDBLite consensus disorder prediction 63 101 - -
Cca05g01355 268 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 113 220 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01355 Cca-Chr5 31652179 31656806 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01355 1 266 Eukaryotic Initiation Factors Gene Family AT5G20920 77.695 2.39e-141 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01355 K03238 - gmx:100783618 511.531