Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01351 ATGAAAGGGAAAGCATTGGGTGTCGTTAAATCCAAGCTTCTCAGGCCATGCAAAAGACTACTATGGTTCTTCAGATTCAAACCCAAGAAGCCTGTCTTTATAAGAGCTCTCAAATTCCGTGCTCACAAGTCTACATTCCCAAAGGCCTTCCCAACAAAGCCAAAAATGTCTTCTTTGTTGCAATCACTGTTTCGTTCTCCAAAGAAATCTAAACATGCAAGCATATTGGAAGGACTCAAGAAGAAGAGCCATGAAGCTTCGAGGCAAGAGGTGGACGATGCATGCAGGAGTTTTGAGAACTATTTGGTGGAGATGATTGTGGAAGAAGGGAAGACCAGAGACTTGATGGACGTGGAGGAGCTTCTATATTGCTGGAGGAATCTTAAGTGTCCTGTCTTCATTGATTTAGTTAGTAGATTTTATGGAGAGCTATGTAAGGACTTGTTTTCTCCAGATGCTGATGAAGGTGACTGTTCCAAGTGA 483 0.4244 MKGKALGVVKSKLLRPCKRLLWFFRFKPKKPVFIRALKFRAHKSTFPKAFPTKPKMSSLLQSLFRSPKKSKHASILEGLKKKSHEASRQEVDDACRSFENYLVEMIVEEGKTRDLMDVEELLYCWRNLKCPVFIDLVSRFYGELCKDLFSPDADEGDCSK 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01351 160 ProSiteProfiles OVATE domain profile. 86 147 IPR006458 -
Cca05g01351 160 PANTHER TRANSCRIPTION REPRESSOR OFP17 55 157 IPR044686 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01351 Cca-Chr5 31610297 31611527 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01351 - - gmx:102659778 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01351 05 31610297 31611527 Cca05g01351 05 31610297 31611527 ECH
Cca01g00584 01 7407365 7408072 Cca05g01351 05 31610297 31611527 PCT