Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01349 ATGGCCCTCTCATGCATGCACCTAAAACTCGGTGAGGTATCAACCATTGTGGTTTCTTCTCCAGAAGTTGTCAAAGAGGTTTTGAAAACCTATGATGCCATCTTTGCTCAAATTAAAGACCCCACCAAGTCGGGGCTGACATCATGTGTTATGGTTCCACTGACATATTGGAAGCAGCTAAGAAGAATTTTCTCACAAGAGCTTCTCATCACCACACGTGTGAGGTCATTTCAATCAATAAGAGATGACGAAGTGTTGAATTTGATGAGATATATTGCTTCCAACGCTGGTTCTTGTGTGAACCTCAGTGAGAAAGTTGCTTTCATGACAAGTTCCATCACTGCAAGGGCAACCTTTGGTGAAACATGCAAGGACCAACAAGTGTTCATTTCCCTTATCAAGAAACTTACGAGGCTGGCCGAAAGGGGTTCCAATATTGAGTTTACACCCTTTGGTGCTGGAAGGAGAATATGTCCAGGCATTATGTTTGGTATATCCAATATTGAACTTTGTCTTGCACAGCTACTTTACTATTATAATTGGGAACAAATGGAACCAATGAAAACTGGAAATGACTGA 579 0.4145 MALSCMHLKLGEVSTIVVSSPEVVKEVLKTYDAIFAQIKDPTKSGLTSCVMVPLTYWKQLRRIFSQELLITTRVRSFQSIRDDEVLNLMRYIASNAGSCVNLSEKVAFMTSSITARATFGETCKDQQVFISLIKKLTRLAERGSNIEFTPFGAGRRICPGIMFGISNIELCLAQLLYYYNWEQMEPMKTGND 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01349 192 PANTHER CYTOCHROME P450 71B11-RELATED 5 142 - -
Cca05g01349 192 Gene3D Cytochrome P450 4 142 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01349 192 Pfam Cytochrome P450 5 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01349 192 Pfam Cytochrome P450 143 184 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01349 192 SUPERFAMILY Cytochrome P450 143 188 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01349 192 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 5 142 - -
Cca05g01349 192 PRINTS E-class P450 group I signature 148 158 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01349 192 PRINTS E-class P450 group I signature 10 36 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01349 192 PRINTS E-class P450 group I signature 158 181 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01349 192 SUPERFAMILY Cytochrome P450 6 139 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01349 192 PANTHER CYTOCHROME P450 71B11-RELATED 141 185 - -
Cca05g01349 192 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 151 160 IPR017972 GO:0005506|GO:0016705
Cca05g01349 192 Gene3D Cytochrome P450 143 191 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca05g01349 192 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 141 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01349 Cca-Chr5 31598741 31600600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01349 121 182 Cytochrome P450 AT3G26320 33.871 7.89e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01349 - K23807 gmx:100779851 172.555