Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01339 ATGGCAACTTCTTCTTCTTCTTCAACAACCACTTTTGCTTTAGCTTTGTTCACGACAATTTTGCTTATAGGAAGTTCTTCAGCTCAACTCTCTGAGAACTTCTATGCTAATAAATGTCCCAAGGTTTTCTATGCTGTGAAATCTGTTGTTCAATCTGCCGTGGCTAAAGAACCTCGCATGGGAGGGTCTCTCCTTCGCCTCTTCTTCCATGACTGCTTTGTCCATGGTTGTGATGGATCAGTACTACTTGATGGGGCTTCCTCGGAGAAGATTGCACCTCCCAACAATAATTCTCTAAGAGGTTTTGAAGTGATTGATGCCATCAAGTCTAAGGTGGAGGCAGTGTGCCCCGGAGTGGTGTCTTGTGCTGATATTGTAGCCATTGCTGCTCGAGACTCTGTTGTAATTCTAGGAGGGCCATCTTGGAAGGTTAAACTTGGTAGAAGGGATTCCAAGACAGGGTTCTTCCAAGTAGCAAGCACTCAAGGTGTGCTCCCATCTCCTGCTTCTTCCCTCAACAACCTTATCTCAAGCTTTCAAGCTCAAGGCCTCTCTGCCAAGGACATGGTTGCCTTATCTGGAGCACACACAATTGGGAAGGCAAGGTGTTCTAGTTATGGTAACCGCATATACAATGACAAGAACATTGACAGTATCTTTGCTAAGGCAAGGGAGAAGAACTGTCCAAGGACATCTAAAGGGACACCAAAAGACAACAATGTAGCAAATCTAGACTTCAAAACACCCAACCATTTTGACAACAGCTACTACAAGAACCTCATCAACAAAAAGGGTCTCCTTCATTCTGATCAGGAACTTTACAATGGAGGATCCACAGATTCATTGGTTACAACTTACAGCAACAATCAGAAAGCCTTTGAGTCTGACTTTGTTGCTGCTATGATTAAGATGGGAAACATCAAACCTTTAACCGGGTCAAATGGGGAGATAAGAAGGCACTGTAGGAGGCCCAATTAG 978 0.4407 MATSSSSSTTTFALALFTTILLIGSSSAQLSENFYANKCPKVFYAVKSVVQSAVAKEPRMGGSLLRLFFHDCFVHGCDGSVLLDGASSEKIAPPNNNSLRGFEVIDAIKSKVEAVCPGVVSCADIVAIAARDSVVILGGPSWKVKLGRRDSKTGFFQVASTQGVLPSPASSLNNLISSFQAQGLSAKDMVALSGAHTIGKARCSSYGNRIYNDKNIDSIFAKAREKNCPRTSKGTPKDNNVANLDFKTPNHFDNSYYKNLINKKGLLHSDQELYNGGSTDSLVTTYSNNQKAFESDFVAAMIKMGNIKPLTGSNGEIRRHCRRPN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01339 325 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 ProSiteProfiles Plant heme peroxidase family profile. 29 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Cca05g01339 325 SUPERFAMILY Heme-dependent peroxidases 29 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 Gene3D - 33 325 - -
Cca05g01339 325 PANTHER PEROXIDASE 72-RELATED 6 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 Pfam Peroxidase 46 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01339 325 CDD secretory_peroxidase 29 323 IPR033905 GO:0004601|GO:0042744
Cca05g01339 325 Gene3D Peroxidase, domain 2 166 304 - -
Cca05g01339 325 PANTHER PEROXIDASE 6 324 - -
Cca05g01339 325 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01339 Cca-Chr5 31419607 31423938 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01339 6 325 Peroxidase AT5G58400 60.185 1.67e-138 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01339 K00430 - gmx:100812415 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01339 05 31419607 31423938 Cca05g01339 05 31419607 31423938 ECH
Cca05g01339 05 31419607 31423938 Cca01g00595 01 7523298 7527958 ECH
Cca07g01717 07 43208602 43211664 Cca05g01339 05 31419607 31423938 ECH
Cca01g01995 01 46624022 46628284 Cca05g01339 05 31419607 31423938 ECH
Cca01g00595 01 7523298 7527958 Cca05g01339 05 31419607 31423938 PCT