Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01336 ATGGATTCTCATCATTTGGTTGTGCTTGTTATGGCTACAATATTTATGATACCTACGACCTTTGCTCAGCTAACTCCTGATTATTATGACAAAGTTTGTCCTCAGGCGTTGCCAATCATAAAGTCAATTGTTAATCAGGCAATTCTTCGTGAAACACGCATTGGAGCATCCTTGCTGCGTTTGCATTTCCATGACTGCTTTGTTAATGGCTGTGATGGATCAGTGCTGCTAGATGACACACCTTTCTTCTTGGGAGAGAAGACTGCACTTCCAAACATTAATTCAATTAGAGGATTTGAGGTGGTTGATGAAATCAAAGCTGCAGTTGACAAAGCTTGCAAAGGTGCAGTAGTTTCATGTGCAGATATCTTAGCTATAGCAGCTCGTGACTCTGTAGCCATATTGGGGGGTCCAGAATATTGGTACCGAGTGCTATTAGGCAGAAGAGATGCAAGATATGCAAGCAGGGATGCTGCAAATGTGAATCTTCCTCCACCATTTTTCAACCTCCCACAGCTTCTTGCTAGTTTCCAATCACATGGCCTGGATCTCAAGGATCTAGTGGTTCTCTCTGGTGGCCACACCATTGGCCAATCAAAGTGCAGTTCCTTCAGAGACAGGATCTTCAATGACACCAACATAAACCCTAATTTTGCAGCCACTTTGCGTGAGTCATGCCCTAGAATTGGTGGAGACTCTAGTTTGGCACCAATTGATGCCACTCCTTCAAGATTTGACACCACATACTATAAGGCTTTGTTGTACAAAAAGGGTCTCTTCCATTCTGATCAAGAGCTATTCAAGGGTGATGGTAGTGAAAGTGATAGGTTGGTAGAACTATACAGCAAGGACCCTTATGCTTTTGCAAGAGACTTTGGGGTTTCCATGATTAAGATGGGTAACATTAAACCTCTTACTGGGTATATAGGAGAAATCAGGTGTAATTGCAGAAAAGTCAACTACTAG 966 0.4255 MDSHHLVVLVMATIFMIPTTFAQLTPDYYDKVCPQALPIIKSIVNQAILRETRIGASLLRLHFHDCFVNGCDGSVLLDDTPFFLGEKTALPNINSIRGFEVVDEIKAAVDKACKGAVVSCADILAIAARDSVAILGGPEYWYRVLLGRRDARYASRDAANVNLPPPFFNLPQLLASFQSHGLDLKDLVVLSGGHTIGQSKCSSFRDRIFNDTNINPNFAATLRESCPRIGGDSSLAPIDATPSRFDTTYYKALLYKKGLFHSDQELFKGDGSESDRLVELYSKDPYAFARDFGVSMIKMGNIKPLTGYIGEIRCNCRKVNY 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01336 321 Gene3D Peroxidase, domain 2 164 299 - -
Cca05g01336 321 Pfam Peroxidase 41 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 CDD secretory_peroxidase 23 319 IPR033905 GO:0004601|GO:0042744
Cca05g01336 321 ProSiteProfiles Plant heme peroxidase family profile. 23 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Cca05g01336 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Cca05g01336 321 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PANTHER CATIONIC PEROXIDASE 5 320 - -
Cca05g01336 321 Gene3D - 27 320 - -
Cca05g01336 321 SUPERFAMILY Heme-dependent peroxidases 23 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca05g01336 321 PANTHER PEROXIDASE 72-RELATED 5 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01336 Cca-Chr5 31379663 31382567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01336 22 320 Peroxidase AT5G05340 56.291 4.96e-119 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01336 K00430 - gmx:100810852 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00597 01 7573102 7575625 Cca05g01336 05 31379663 31382567 PCT