Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01322 ATGGCTCTAGTGAACATAACCACGAACTCCAGTACGGCCTTGAACACGAGCCAATGGAACTGCGAACACTCATCTAAGTTTCAACGTTTTTCAAAAGGAATATTCTACGGGGAAAACCCTTTAAACCACACGCTATCAGTGATTACTCTACAAGCTTCCTTAGTCTGTTTTTCGACCTCATGGTTGCAATTCTTTCTTGCCCCACTTGGGGAGGGTAGCTTCATTCCACAAGTGCTGGCAGGGTTGCTAACGGGACCAACAATACTGGGAGGAATTAAAAGCGTTAAAAGATGGCTATTCCCCGCAAAACCTTTCTACGTATGCAACACAATCTCCTTTCTAGGGTGCGTGTTTTTCTTGTTCCTTGTGGGAATCAAAATAGAGCCATCGATGGTAATGAGAACAGGGAGAAAGACTTGGGCTATTGGCTTGTGTTCTTTTGTATTTCCAGTCCTATTGAGCATACTTTGTGCTTTGGCTATACGACAAACTTTGAACCCGGAAACAGACCTCTACAAGTCCATATATTATATTGCAATTTTCTTATCAGGTGGTTCCTTTCACGTCACTGCGACTCTTCTAGAAGACCTAAAGCTCCTAAACTCGGAGGTTGGTCAGTTAGCTCTCTCTTCATCTATGGTGAGTGGAGCAGTCTCTGCAATGTGGGAGGTCTTTATAATCACTCGGCAACAATCAACTTTACAGAAAAAGAAAGACAAATCTTCCATCATGATGATCATTTCCTTGGTTGTTCTGGTGATTTTCATCTGTTTTGTTCTTCGACCTATCATGTTATGGATGATACGAAAGACACCCAAAGGGAAGCCCATCAAAGAGTCCTACATAATTTCCGTCTTTCTTATGTTGTTGGTGTGTTCATTTGCTGGGGAGTTCATTGGGGAGCACTTCTTGGTTGGGCCTATTCTTTTGGGCCTGGCAGTGCCAGAAGGCCCACCACTCGGATCAGCATTGGTAGAAAGGCTAGATAACATAGTCTCCGGAGTGTTCATGCCTTTGTACTACCTCAATAGTTCTTCTAGCTTCAAGATTTATCTAATAGATGGTCGTAGCCTTGCAGTGGTGCAACCTGTGGCCTTTATTAGCTTCTTTGGGAAGGTATTGGGAGCCATGTTGCCTTGCCTTTATTCCAATATGCCACTCACTGATTCTCTCTGCTTAGCTCTCCTAATTAGTGCCCAAGGCATCACCCACTTGCTTCACCTACAGACTTGTCAATACCTTCGTGTTATAGATGATCAAACATATGTTCAAATGGTGATATCTTTAATATGGTTGACAGCAGTTTCCACCCCTGTAGTGAAATTCCTTTATGACCCATCTAAGAGTTATTTGTCCCTAAATAGGGGTAAGACCATTGAACATGCCCCTCCCAATGCCGTCCTTCCCTTGATGGCATGCATACACTTAGAAGAAAACACCCTACCCATGATCAATGTTATAGAAATGTCCAACTCCACAATTGAAAGTCCTATTTTCCTTTATGTCTTGCACCTCATTCAACTAGTAGGTAGATCAGCCCCAGTTTTAATGGACCATCAACTCGATTTTAATTTCAGTCAAGTTAGCTACCATTCACAGAGCATAATAAATGCGTTCAAATCATACGAGCAACAACACACTGGCAACATGATGGTGAAACTCTTCACATCCATCTCCCCTTATGAGAGTATGCACGATGAGATATGCATGCAAGCTGCAAAGCAAAGAGCATGCATGTTGATTATGCCTTTTCATATGCAATGGAGATCAACTCAAATTATAGAATTAGCGCACCCCATTAGAGATTTAAACCTTAATTTGCTCCGAAATGCACCTTGCTCTGTTGGGATCCTAGTTGAACGAGGCAACGTGATCAACAACAACCCTTTAACAACTGTGTCCTTCTACAGTGTTGGAATTGTATTCATTGAAGGGTCAGATGACCGTGAAGCGTTATCATACGCAATGCGCATGGCTGGTCACCCTAATGTAACGGTCACGGTAATTCGGTTGATAGAGCCTGGCAAGAAGAGTAGAACTTATGTCGACACAGACCCTGATGGTGACTTGATTCACAAGTTTAAGGTTGACTTCATCGAAATCAAACGCCATGATTACAGGGAGGAAGTTGTGAGAGATAGTGTGGAAATGGTCAATGTCATAAGGTCACTAGAAGGTTGCTATGATTTGATTTTGGTGGGTAGATGCCACGACAGCGAGTCTCCATTGTTTAGTGGGTTGACAGAGTGGAATGAGTATCCAGAACTCGGTTGTGTAGGAGACATGTTAGTGTCTTCGGATTCTAATTTTGACGGGTCTGTGTTGGTGGTGCAACAACAACATAGGGTAGGGGTTAGTCGCAATGATTTGAACAATTCCTTAAATGCAAAGCAAGAAACCATAACCATTTTAGAA 2415 0.4265 MALVNITTNSSTALNTSQWNCEHSSKFQRFSKGIFYGENPLNHTLSVITLQASLVCFSTSWLQFFLAPLGEGSFIPQVLAGLLTGPTILGGIKSVKRWLFPAKPFYVCNTISFLGCVFFLFLVGIKIEPSMVMRTGRKTWAIGLCSFVFPVLLSILCALAIRQTLNPETDLYKSIYYIAIFLSGGSFHVTATLLEDLKLLNSEVGQLALSSSMVSGAVSAMWEVFIITRQQSTLQKKKDKSSIMMIISLVVLVIFICFVLRPIMLWMIRKTPKGKPIKESYIISVFLMLLVCSFAGEFIGEHFLVGPILLGLAVPEGPPLGSALVERLDNIVSGVFMPLYYLNSSSSFKIYLIDGRSLAVVQPVAFISFFGKVLGAMLPCLYSNMPLTDSLCLALLISAQGITHLLHLQTCQYLRVIDDQTYVQMVISLIWLTAVSTPVVKFLYDPSKSYLSLNRGKTIEHAPPNAVLPLMACIHLEENTLPMINVIEMSNSTIESPIFLYVLHLIQLVGRSAPVLMDHQLDFNFSQVSYHSQSIINAFKSYEQQHTGNMMVKLFTSISPYESMHDEICMQAAKQRACMLIMPFHMQWRSTQIIELAHPIRDLNLNLLRNAPCSVGILVERGNVINNNPLTTVSFYSVGIVFIEGSDDREALSYAMRMAGHPNVTVTVIRLIEPGKKSRTYVDTDPDGDLIHKFKVDFIEIKRHDYREEVVRDSVEMVNVIRSLEGCYDLILVGRCHDSESPLFSGLTEWNEYPELGCVGDMLVSSDSNFDGSVLVVQQQHRVGVSRNDLNNSLNAKQETITILE 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01322 805 Pfam Sodium/hydrogen exchanger family 62 439 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca05g01322 805 PANTHER CATION/H + ANTIPORTER 15 791 - -
Cca05g01322 805 Gene3D - 46 449 IPR038770 -
Cca05g01322 805 PANTHER CATION/H+ EXCHANGER 2 15 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01322 Cca-Chr5 31063554 31066686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01322 31 791 Antiporter Super Family AT2G13620 34.387 2.22e-146 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01322 - - gmx:100790969 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01322 05 31063554 31066686 Cca05g01322 05 31063554 31066686 ECH