Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01320 ATGGCTCATACAATCTACTTCTTAATTTTGATGCACGCATGCACCTTTGTAGTTGTTACAAGCATTAGGAATGTCTCAATGACACCCAAGTTCTCATCTATTCTAGTCTTTGGGGATTCAACAGTAGACACAGGGAATAACAACTACATCAATACCTTAGCCAAGGGAAATCATTTACCCTATGGTAAGGATTTCCCTGGTCACGTGCCTACCGGTAGATTTTCTAATGGGAAATTGGTTCCTGACTTTATTGCCTCTATGTTGAACCTTAAAGACACTGTCCCTCCTATCTTTGATCCAAACCTATCAGATGAAGAACTTCTCACAGGTGTTAGCTTCGCATCTGGCGGATCAGGTTTTGATGATTTGACTACGGCTTTATCTGGTGCCATAGCAATGTCCAAGCAAATTAAATACTTTAAAGTTTATGTAGAAAGGATCAAGAACATTGCAGGGGAAAATGAAGCTAATCGAATACTTGGAAATGCGCTGATTATTATTAGTGCAGGAACTAATGACTTTCTCTTCAACTTTTATGACATTCCTACTAGGAAATCGGAGTTCAACATTGATGGATACCAAGATTATGTGCAGAATCGGCTTCAAATCTTCGTTAAGGAACTATACGACCTTGGATGCAGAAAATTTGCTGTTACTGGGCTTCCTTCCATTGGTTGCATACCCATTCAAATAACAGCGAAGTTTGAAAGCTTAAAGGAACGGAAATGTGTAGAGGATGAGAATTCAGATGCGAAGCTCTACAATCAAAAATTAGCATCGCGATTGCTTAAAATACAAGCAATGCTTCCAGGAAGCAGAGTTGTTTATACAAATGTATATGACCCATTGATCAACCTTATCAATCAACCGGAAAAATATGGCTTCAAGGAAACAAGTAAAGGGTGTTGTGGAACTGGCTTATTTGAAGTAACTCCACTGTGTAATGAAATCACACCAATATGTGGTGACCCTTCAAAATATGTATTTTGGGACAGTGTCCATCCAACGGAAGTAGCCTACCAGTACATTGCTAAATACCTAGAAATGAATGTCCTGCCCAAGTTCCAATTTCATATGGATTATATTTCTTAA 1092 0.3864 MAHTIYFLILMHACTFVVVTSIRNVSMTPKFSSILVFGDSTVDTGNNNYINTLAKGNHLPYGKDFPGHVPTGRFSNGKLVPDFIASMLNLKDTVPPIFDPNLSDEELLTGVSFASGGSGFDDLTTALSGAIAMSKQIKYFKVYVERIKNIAGENEANRILGNALIIISAGTNDFLFNFYDIPTRKSEFNIDGYQDYVQNRLQIFVKELYDLGCRKFAVTGLPSIGCIPIQITAKFESLKERKCVEDENSDAKLYNQKLASRLLKIQAMLPGSRVVYTNVYDPLINLINQPEKYGFKETSKGCCGTGLFEVTPLCNEITPICGDPSKYVFWDSVHPTEVAYQYIAKYLEMNVLPKFQFHMDYIS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01320 363 Gene3D SGNH hydrolase 20 351 IPR036514 -
Cca05g01320 363 CDD SGNH_plant_lipase_like 33 347 IPR035669 -
Cca05g01320 363 Pfam GDSL-like Lipase/Acylhydrolase 34 347 IPR001087 GO:0016788
Cca05g01320 363 SUPERFAMILY SGNH hydrolase 32 347 - -
Cca05g01320 363 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 26 346 - -
Cca05g01320 363 PANTHER GDSL ESTERASE/LIPASE EXL3 26 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01320 Cca-Chr5 31047870 31050017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01320 8 351 Pollen Coat Proteome AT1G75910 36.311 4.79e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01320 - - gmx:100817270 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01320 05 31047870 31050017 Cca05g01320 05 31047870 31050017 ECH