Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca05g01319 | ATGCCAAACCAGATTCAACCCCCTTTAGAAATTAAGCACTATGCCTATCCGAAATTCCAATCGGCTATTGGTACAGAAAAAGCTATGGAAAATTGTGGGATTTATGTCAAGTCTGATTGGACTGATCTGTTACGCGTTGAGTTCCTCTTTCAACCATCTATTCGGAGAGTGGAACTTCTTGAAGATCATCCTTTACACCGGGCCATCTTCTGCTATTGTTTCATAGTTCTTCGTTTCAAATTGGACTCTCAACCACAGATTGGAACACTAGGGGTGGAAGACCATGTAACCATAGAAATTGATGCTGCAAATGGAGGAGAAAGAGGAGCTGATCACAATCACAACAGAAGTGACTTCCAATCTAACCATAGCAATGGCCACCGACAAATTCAGTTGCTAAGTGACGAGTACAATTGGAAAAAATTTGAAGATAAAGTAGTGAAAGGGAATGAAAATCAGATAAGTTACTACAAATGCACACACCCCAATTGTTTTGTAAAGAAAAAAGTTGAGAAAACTAAAGATGGGGAAATTATTGAGATACACTACGAGGGTACCCACCCCCATACTAAGGCTAAGCATTCAATGAAACGGAACTCATCACATGAATATCTATATTCACTGTTACCGTCAGAGCGTGACACCACTTACTTGCCAGATCAATCATTTCCCTCCCAGGGTAGTGGACAATTGGATTATGATGTGCAGCACCGGAGTACTCAATATTCATATGAAATATAA | 741 | 0.3995 | MPNQIQPPLEIKHYAYPKFQSAIGTEKAMENCGIYVKSDWTDLLRVEFLFQPSIRRVELLEDHPLHRAIFCYCFIVLRFKLDSQPQIGTLGVEDHVTIEIDAANGGERGADHNHNRSDFQSNHSNGHRQIQLLSDEYNWKKFEDKVVKGNENQISYYKCTHPNCFVKKKVEKTKDGEIIEIHYEGTHPHTKAKHSMKRNSSHEYLYSLLPSERDTTYLPDQSFPSQGSGQLDYDVQHRSTQYSYEI | 246 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca05g01319 | 246 | SUPERFAMILY | WRKY DNA-binding domain | 129 | 190 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca05g01319 | 246 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 99 | 203 | IPR044810 | GO:0003700 | |
Cca05g01319 | 246 | ProSiteProfiles | WRKY domain profile. | 128 | 192 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca05g01319 | 246 | Gene3D | WRKY domain | 119 | 192 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cca05g01319 | 246 | SMART | WRKY_cls | 133 | 191 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca05g01319 | 246 | MobiDBLite | consensus disorder prediction | 106 | 125 | - | - | |
Cca05g01319 | 246 | Pfam | WRKY DNA -binding domain | 135 | 189 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cca05g01319 | 246 | PANTHER | WRKY TRANSCRIPTION FACTOR 33-RELATED | 99 | 203 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca05g01319 | Cca-Chr5 | 31040335 | 31041615 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca05g01319 | 130 | 202 | WRKY Transcription Factor Family | AT4G26440 | 45.946 | 2.33e-11 | 61.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Cca05g01319 | WRKY | 5.6e-17 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca05g01319 | K13424 | - | ccaj:109792596 | 380.948 |