Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01318 ATGAGGCTTTTGCTCAGTCAAATCACTAGGTGGCTGACGCAGGTAGCTGTATGGAGATTTGTGGGTTTTGTTTCAACCTTTGTTGGACTTCTTTGTTATGCTCTCAGTTCCTCCTTCAACCATCTATTCGGAGAGTGGAACATGTTGAAGATATTTCTTTACACTGTTTTTGGTCTCTTCATCTGCCTTTGGAGTCTGTTTGCAAAGAAGGACAATTTGAATCTCATCAGCATGCTTTTGGAGCGTACGAAGGAATACCTTGAAGATGAATCTAAAGATTCTGAACTTACAGGTATGGACCATAACTTTGTGATGGATGCACTACCATCAGAAAAAATCAAGGACCTTGAAGAAACTATAATGCTGATGGTGAGCAATGGGTTTGAGAAAGAGTGCTGTGACGAGTACTGTAATTGGCGGAGGGAAAGCTTAGAGGAGTGCTTAACAAGTTTATTTGGGTTGCAAGAGATCAACATTGAACAGGAACATGAAGGGAAGAAGTTAGAAGAGTTCGTTATTGGAAGATGGATTAAAGTTGTGAAGGTGGCTTTTAGGATACTATTTCCCAGTGAGCGACGACTCAGTGATCGCATCTTCGTAGGGTTCTCTTCTGTCGCTGATCTTTGTTTTACTGAGGTTTGTCGAGGAGCCGTGATTCAGTTGTTGAATTTGGCTGATGCGGTTGCGAGTGGGAGCCCTTCAGAGTGGCGTTTGAACAAAATCACTGACATGTTTGAGACATTGTGTGACCTAACTCCCGAGTTACAATCACTGTTTCCAGAGTCATTGGTAAAGGAAGTGATGACAGTCAACGACAAATTAGGAGAAGCAAGCAGGGATATTCTCATGAAAATGGAAAATAAATTTTTCCGTAACTCAGAGGCAAAGGTAATTGCTCCTACAGATGGTTGGGTTTATCCATTGACCATATATGTCATGGACTCAATCGCTTTTCTACATCGCAAAAGACAGATTTTGGAGCAAATTTTAGTACAATATCCTAAGTTGACTACTGGAGCAGGAACATCTTCAGTTTCTTATCAAATTGATCGAATAATGAAGCGGTTCGAGAAAAAACTGGAGGCGATGTCCCAAAGCTACAAGGACCCTGCTTTACGCTACTTTACCATGATGAATAATTGGACATGGATTGAACTTTATGCAAAAAATTCGGGATTTGATCTTGATTGTTTCCGAAAGAGCACAAAAATAATTAAAAAAAATCGTGAACTTTATCTAAGCTCTTGGGATATGGTGCTAGAGTTTTTGAAGCTAGAGAAAAATGAAATAGTTGAGCCCAATGCTAACGTAGAGTCACTGAAAGACAAGCTAAAATTGTTCAACAAGCACTTTAGTAATACATGTGCCACTCAATCTAAATGGGTTTCCTTTGATAAGCAGCTAAGGGAACAAATAATAATATCATTGCAAAACATTTTGTTGCCGCCATATGGAAACTTCATTGGGAGATTTCATGATATTCTCGGTAACCATGCTTATGAGTATATTAAATATGGAATGTTTGATATTCAAGACCAACTCAATCATTTGTTTCGTGGAAGCACGCCAATGAAACAGTATTTCGAAGCAAAGCCAAGGGAAAGACTATTACAGCATGTATAA 1623 0.3925 MRLLLSQITRWLTQVAVWRFVGFVSTFVGLLCYALSSSFNHLFGEWNMLKIFLYTVFGLFICLWSLFAKKDNLNLISMLLERTKEYLEDESKDSELTGMDHNFVMDALPSEKIKDLEETIMLMVSNGFEKECCDEYCNWRRESLEECLTSLFGLQEINIEQEHEGKKLEEFVIGRWIKVVKVAFRILFPSERRLSDRIFVGFSSVADLCFTEVCRGAVIQLLNLADAVASGSPSEWRLNKITDMFETLCDLTPELQSLFPESLVKEVMTVNDKLGEASRDILMKMENKFFRNSEAKVIAPTDGWVYPLTIYVMDSIAFLHRKRQILEQILVQYPKLTTGAGTSSVSYQIDRIMKRFEKKLEAMSQSYKDPALRYFTMMNNWTWIELYAKNSGFDLDCFRKSTKIIKKNRELYLSSWDMVLEFLKLEKNEIVEPNANVESLKDKLKLFNKHFSNTCATQSKWVSFDKQLREQIIISLQNILLPPYGNFIGRFHDILGNHAYEYIKYGMFDIQDQLNHLFRGSTPMKQYFEAKPRERLLQHV 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01318 540 Gene3D Exocyst complex component Exo70 63 527 - -
Cca05g01318 540 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 49 IPR004140 GO:0000145|GO:0006887
Cca05g01318 540 PANTHER EXOCYST COMPLEX PROTEIN EXO70 92 519 IPR004140 GO:0000145|GO:0006887
Cca05g01318 540 Pfam Exo70 exocyst complex subunit 175 515 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca05g01318 540 PANTHER PROTEIN, PUTATIVE-RELATED 9 49 - -
Cca05g01318 540 PANTHER PROTEIN, PUTATIVE-RELATED 92 519 - -
Cca05g01318 540 SUPERFAMILY Cullin repeat-like 80 518 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01318 Cca-Chr5 31030741 31032849 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01318 100 526 EXO70 exocyst subunit family AT5G58430 43.736 1.24e-101 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01318 K07195 - ccaj:109790941 1091.64