Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01317 ATGTCAGAAAACGGGGAAGAGAAGTTACTGGCTGTGGCGCGGCACATAGCGAAAACGCTGGGGCACAACAACACCATGTCTGATGACATATTCCAAATACTCTCCAACTTCGACGGAAGGTTCTCGAGAGAGAATCTTTCCGAAAAGGGCGCAGAGGCAGATTCCAGGGCCTGCGCCGCACTCGATCACTCCCTCAAAACCCTAGACCGCCGGATCTCTAACTACGTCTCCTCCGACCGCCCAATCTGGGCCGACGCCGCGGACTCCGCTGCCTTTCTCGACGCCGTGGACGAGCTCGTCGCCGCCGTCGCCGAGTGGAACCACCTCGCCTCCGACAAGGCCGTCGCCGCGTGCCTCGTCCGCGCCGAGGACATGCTCCAGCACGCCATGTTCCGCCTCGAGGACGAGTTCCGCTCGCTCATGGAGCGCGGCGGCGAGTCCTTCGGCCTCACGCGCGACCCCCGCCACGGCGAGTCCGCGGAGAATTTGCCGTTCGACTCGgaggacgacgacgacgatgaagaagctaggaacggcgacgatgaGCAGATTCCGGTGGCGCTGCCGGTCACGGACTTCGACATCATCATTGACGCGCTGCCGGCGGGGACGATCAACGACCTCCACGAGATCGCGAAGCGAATGGTGGCCGGCGGGTTCGGGAAGGAGTGCTCGCACGTGTACAGCAGTTGCCGGAGGGAGTTCTTGGAGGAAAGCATCTCGAGGTTAGGGTTACAGAAGCTGAGCATCGAGGAAGTTCACAAGATGACGTGGCCGGACCTCGAGGACGAGATTGAGAAGTGGATCAAAGCCTCCAACGTCGCTCTCAAAATCCTCTTCCCCAGCGAGCGTAGACTCTGTGACCGCGTCTTCTTCGGATTCGCCTCCGCCGCGGATTTCTCGTTCATGGAGGTTTGCCGCGGATCCGCCATTCAGTTGCTGAATTTTGCCGACGCCGTCGCCATCGGGAGCCGTTCGCCGGAGCGGTTATTCAGAATCCTCGACGTGTTCGAGACGCTGCGTGACCTAATTCCGGAGTTTGATGCTCTGTTTTCTGATCAGTTCAGTGTGTCGCTCAGGAATGAAGCGGTTACTATTTGGAAGAGATTGGGCGAAGCGATTAGGGGCATTTTTATGGAGCTGGAGAATTTGATTCGCCGGGATCCGGCGAAGATGGCGGTTCCCGGCGGCGGTCTTCATCCGATTACTCGCTACGTGATGAACTACCTCCGTGCGGCTTGCCGGTCGCGGCAGAGCTTGGAGCAAGTTTTTGAAGATTATGGATTAAAAGACTATCCCAAGCTTGATGATAGGTTGCCCAATTCATCTTCTCTGTCAGTGCAAATGGATTGGATTATGGAGCTGTTAGAGAGCAATTTGGAAGCTAAGTCCAAGATTTACAAGGACCCTGCATTGTGTTATGTTTTCTTGATGAACAATGGCAGGTACATTGTTCAGAAGACCAAGGACAGTGAATTGGGAACCCTCTTGGGGGATGATTGGATCCGAAAACACGCTGCAAAAGTTCGACAATTCCATGTGCATTATCAAAGAAGCTCGTGGAATAAGGTTCTGGGGATTCTGAAGCTGGATAGTAATGGCTCGTTGCCTCCTAATGGTTTAGCAAAAGCAATGAAGGAGAAGCTCAAGTCGTTTAACGCGGCGTTTGAGGAGATTTGTAGGGATCAGTCTTCATGGTTTGTCTTTGATGAGCAGCTTAGGGAAGAAATAAGAATTTCCCTTGAGAAGATCTTGTTGCCTGCTTATGGAAACTTCATTGCGAGGTTTCAGGGTGTTCCGGAGCTTGGGAAGCATGCTGATAAGTATATCAAGTTTGGAACGGAGGACATTCAATCAAGACTCAATGATTTGTTTCAGGGAAGCAGTGGATCAACTGGTAGCCGAAAGTGA 1911 0.5254 MSENGEEKLLAVARHIAKTLGHNNTMSDDIFQILSNFDGRFSRENLSEKGAEADSRACAALDHSLKTLDRRISNYVSSDRPIWADAADSAAFLDAVDELVAAVAEWNHLASDKAVAACLVRAEDMLQHAMFRLEDEFRSLMERGGESFGLTRDPRHGESAENLPFDSEDDDDDEEARNGDDEQIPVALPVTDFDIIIDALPAGTINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESISRLGLQKLSIEEVHKMTWPDLEDEIEKWIKASNVALKILFPSERRLCDRVFFGFASAADFSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRILDVFETLRDLIPEFDALFSDQFSVSLRNEAVTIWKRLGEAIRGIFMELENLIRRDPAKMAVPGGGLHPITRYVMNYLRAACRSRQSLEQVFEDYGLKDYPKLDDRLPNSSSLSVQMDWIMELLESNLEAKSKIYKDPALCYVFLMNNGRYIVQKTKDSELGTLLGDDWIRKHAAKVRQFHVHYQRSSWNKVLGILKLDSNGSLPPNGLAKAMKEKLKSFNAAFEEICRDQSSWFVFDEQLREEIRISLEKILLPAYGNFIARFQGVPELGKHADKYIKFGTEDIQSRLNDLFQGSSGSTGSRK 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01317 636 SUPERFAMILY Cullin repeat-like 83 625 IPR016159 -
Cca05g01317 636 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 626 - -
Cca05g01317 636 MobiDBLite consensus disorder prediction 148 163 - -
Cca05g01317 636 MobiDBLite consensus disorder prediction 164 179 - -
Cca05g01317 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 626 IPR004140 GO:0000145|GO:0006887
Cca05g01317 636 MobiDBLite consensus disorder prediction 148 183 - -
Cca05g01317 636 Pfam Exo70 exocyst complex subunit 267 623 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca05g01317 636 Gene3D Exocyst complex component Exo70 82 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01317 Cca-Chr5 31026190 31029015 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01317 1 629 EXO70 exocyst subunit family AT5G58430 71.429 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01317 K07195 - gmx:100803694 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca05g01317 05 31026190 31029015 Cca05g01317 05 31026190 31029015 ECH