Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01316 ATGAAGTTCTGCTTGCTTGAGAAAAAACATCATGCTCAACATAATTCAGTGTTGGCTGTGTCAGCCAAAGTTTCATCATTTCCCTTGCCGTCTTGTTTGCAAGGACATGGGAGTGCTTCACTTCTTCCAGGTTTGTCAAGACTGAGTCACTTTGGATTTGAGGTCGATCTCCTGTACTTTTTCAGTGGTGCTTTAATAGTACAACTCATGAAAATAAAATTATGGTTAGTCATTGTTGGAGGGAGTTTCAGTTATTCTCTTATCATTCTGCGTTCCACTCTGGACCCTCGGTCAAGGAGTAGATTTCATAGATTTCAAGACCAAGATCATGTAGTGGTTGAAATTGGTTCGCATTCACAATCACGAGCAATTATTATTGCCCCTGATAATCCTCATCCACAACCAGTCACTGATATTGTTTGGCCTTCTCGAGGAAACAATCATAGTGCTTCTCATGTGGATTCTCCCCAAGAGGCTAATGTCCCTCCAGGAAATAGAGACAATAATAGTACCATGGCAAAGTTCATGCTTTCTATAGAGGCGCTTCAGAAGGAGAACAAGAGTGTTATTAGCACAATTACCAAGCATGTTGGTGAATATCTTAAAGCTAATGTTCTTGATGAGGACCAGACTTCAGTGCCGAAATTGCATCCTGACGACAACTTGTTGATTGATGTGTTGCCGCGGGGGATTGTCAAAGAACTTCATCAAAGCGTAAAGCAGATGGCGTTAGATGGGTTTAAGAAGGAATGCTTACAAGTGTACACTAATCTCAACACGGAGGACGTTGATGACAAGATGGAGAAGCTTGAGAGTTGGATAAAAGCTTTAAACATAGCTGCGAGGATACTCTTTCCGAATGAAAGGAAACTCTGCCATCTTGTCTTTGAAGCCTATATTTCCTCTTGGGAGTTTGTTTTCAGAGAGATATGCACAGAGTTGGCGATTAGTCTACTGAGCACCGCCCTAGCTTTAACAACTTGGAGCCATTTAATCCGCAACTCATTGCAGGAACTGATACAAGAGTTGGAATCATGTACAACACTCAGAAATAATGCAGTGGTCCTGATTAGACAGAGATTGTGCATCTATGAGGCGTTGGAAAATGTATCACCTGTACCGGGTGGCGGTATTCATCCGATTACCCTTGAAGTGATGTACTACATTTATTCTGTTTACAAGAATAGGGATATTCGTAAACTTTGTCAATGTTTAGAAGAAGGAAAGATTTCAAAGCCTGTGTACGTGGCCAGGATAACAGAGCTGTTTGGGAGAAAAAGAAGTTGGGAAGCCAAGTCCAAAAGTTACGATAACTTTGAAGTAAGTTACTACATGTATTGTGTTTACATAAATAAGGATAATAAACTTAGCCAAGGTTTAGAAGAGGGAAAGCTTTCTTCACCTATTTACATGACCAAGATGACAGAGCTTTTGGAGAACAGTTTGGAAGCCAACTCAAAAAATTACAATAACCCTACATTGGGTTATATTTTCATCATGAACAATAGGAGGTTCATAGAACTAGAGGCAAAACTATGTGGTTTGGATCCTATTTTTGACAATGATTGGCTCCAAAAGAACACAACAGAATTCCAAAAAAACCTTGAACTCTATAAGAGAAGCTCATGGAATAAGATTTTGGACTTTTTGAAGCTGGACATCAATGAGTCAAAGCCTAATGTTGCAGCTGAGTTGATGAAACAAAAACTCCATTGGTTCAATGAACACTTTGATGAGACTTGCAACGTGCAGTCTGCATGGTCTGTCTGTGATGAGGAGTTAAGGGAACAAATAATAAAATCCATAGAGAACATCTTGTTGCCAGTATATGGAAACTTTCTTGGGAAGTTTCAGGAACTTCTTGGGAAGCACGCTTATGAGTACATTAAGTATGGAGTGTTTGACGTTCAAGATCGAGTCAACAATTTGTTTCTTGTAAGGCAGTAG 1947 0.3986 MKFCLLEKKHHAQHNSVLAVSAKVSSFPLPSCLQGHGSASLLPGLSRLSHFGFEVDLLYFFSGALIVQLMKIKLWLVIVGGSFSYSLIILRSTLDPRSRSRFHRFQDQDHVVVEIGSHSQSRAIIIAPDNPHPQPVTDIVWPSRGNNHSASHVDSPQEANVPPGNRDNNSTMAKFMLSIEALQKENKSVISTITKHVGEYLKANVLDEDQTSVPKLHPDDNLLIDVLPRGIVKELHQSVKQMALDGFKKECLQVYTNLNTEDVDDKMEKLESWIKALNIAARILFPNERKLCHLVFEAYISSWEFVFREICTELAISLLSTALALTTWSHLIRNSLQELIQELESCTTLRNNAVVLIRQRLCIYEALENVSPVPGGGIHPITLEVMYYIYSVYKNRDIRKLCQCLEEGKISKPVYVARITELFGRKRSWEAKSKSYDNFEVSYYMYCVYINKDNKLSQGLEEGKLSSPIYMTKMTELLENSLEANSKNYNNPTLGYIFIMNNRRFIELEAKLCGLDPIFDNDWLQKNTTEFQKNLELYKRSSWNKILDFLKLDINESKPNVAAELMKQKLHWFNEHFDETCNVQSAWSVCDEELREQIIKSIENILLPVYGNFLGKFQELLGKHAYEYIKYGVFDVQDRVNNLFLVRQ 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01316 648 MobiDBLite consensus disorder prediction 145 165 - -
Cca05g01316 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 44 445 IPR004140 GO:0000145|GO:0006887
Cca05g01316 648 SUPERFAMILY Cullin repeat-like 204 644 IPR016159 -
Cca05g01316 648 PANTHER PROTEIN, PUTATIVE-RELATED 455 645 - -
Cca05g01316 648 Pfam Exo70 exocyst complex subunit 272 326 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca05g01316 648 Pfam Exo70 exocyst complex subunit 360 641 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca05g01316 648 PANTHER PROTEIN, PUTATIVE-RELATED 44 445 - -
Cca05g01316 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 455 645 IPR004140 GO:0000145|GO:0006887
Cca05g01316 648 Gene3D Exocyst complex component Exo70 152 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01316 Cca-Chr5 31015044 31017606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01316 209 644 EXO70 exocyst subunit family AT5G58430 33.333 1.46e-71 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01316 - - ccaj:109807809 1203.35