Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01315 ATGCTATTCAAAATTCAGAGTCGGTTGTTGCAACCAAAGGTATGGAGATTTGTGTGTTTTGTCTCATCTGTTGTTGGACTACTCAGCTACGCTCTCAGCTCCTCCTTCAATCAGTTATTTGGAGAGTGGAGCTGGTGGAAGATACTACTTTTTATTGTTTTCAGTTTCATCATTTCCCTTTTCGTCTTGTTTGCAAAGGCATGGCAGAATTCCACCTCTACCAGGCTGGAAGCTCATATAGCCTTTTTTACTTTGCTCATAACTTCTGTGTACTCATTTTTCTTGGATAAAGAAGTGAAAGGGAAACCAGATGCATATAGCCTTGTTTCCTGTGCCGCATTTGCTATCATGTCTCTAGGCTTGTCGAGACTGAGTCACCTTGGATTTGAGCTAGATCTCTTGTATTTTTTCAGTGGAATTTTAACAGTACAACTCATGAAAATAAAATTGTGGTTGGTAATTGTTGGAGGGAGTTTCAGTTATTCCCTCATCATTCTTCGTTCTAATTTGGATGCTTTGTCAAGAAGTGGGTATCTTGAACTCCATGTCCCAGACCATGTAGACATTGAAATTGCTTCGAATTCACATGGATCTGGTCACGTTGCTTCTCAAGTTGATTCAACCCAAGTAATTACTGGTGCTGGTAATACTCATCTTATGATTATCAGGCCACAAGAGGCCGATGCCACTCCACAAAATGAGGATCTAGGATTCTCGTTCTCTCAAGTTGGTTCAGCTTCACAAGAAGGCAAAAGTGGTCGTGATAATAGTATCATTGCACGGTTCATGGGTTGTATAGAAGCGCTTAAGAAGGAGAAAACAAACGTTATCCACACGATTTCCAAGCATGTAGACAAATACCTTAAGACTAATGTTGTCGTTGACGAGAACTATATTCCGGTGTCGGAAATTCATTGTGACGACAACTTGGTGATGGATGCATTGTCACCCGAAATTATCAATGACCTTCGTGAAAGCGTGAGGTTGATGGTGACAGCAGGATTTGAAGAAGAATGCTGCACAGCGTACTGTAGTTGCCGGAGGGTGTTTATGAATGAGATTCTCTCGATATTTGGATTGCAAGTGCAAGAGCTCAAAAGAAAGGAAATTGATATGATGAAGATAAAATCTTTGAACGCACTAGTGAGGATACTTTTTCCCAATGAAAGGAGACTCTGTGATCGTGTATTTGAAGGTTCCATTTCCTCTATGAGGGAGGTGTATGCGAATTTGACAATTCCTCTAATGATCATTGTCAATGCTTTAGCTATTTGGAGCAATTCGCCAAGTCCTTTTTCTGGCAAATTTTTGGAGTTGAAAAAACTTATTCTTACTTATGGTGATAAGGTTCAGGCCACTGTTCCCTGTGACGGGCTTCATCCGATTACCCGTGAAGTGATGAACTACATTCGTGATGTTTCCATAAATAGGAATAGTAGCCCAAGGCATGATTTGGAAGAATCCACCATGATTGATAGAGTGGGAAAGCTTTCTCTATCTGTGCACATGGCCAAGATAATGGAGCTGTTAGAGAGAAGTTTGAAAGCCAACTCCAAAAATTACAATAACCCTTCACTGGGTTACTTTTTCATCATGAACAATCGGAGGTTCATAGAGCTAGAGGTAGAATTATATGGATTAGGACCTATTATTGGTGATGACTGGCTTCGAAAAAACAGAACAAAATTTCAACAAAACCTTCAACTCTATCATAGAAGCTCATGGAATAAGATTGTGAACATTTTGAAGCTGGACATCAATGAGTCCCCTAATGTTGAAACTGAGTTATTGAAAGACAAGCTTAATTCTTTCAATGAACACTTTGATGAGATATGCAATGTTCAGTCTACGTGGTTTGTCTTTGATGAGCAGTTAAGGGAACAAATAATAAAATCTATAGACAACATCTTGTTGCCTGCATATGGAAGTTTCATCAAGAGGTTTCAGAATTTTCTTGAGAAGCAAGCTTATGAGTACATTAAGTATGGAATCTTTGATGTTAAAGAACATGTCAACAATTTGTTTCTAGTAAGGGAGTAG 2040 0.3922 MLFKIQSRLLQPKVWRFVCFVSSVVGLLSYALSSSFNQLFGEWSWWKILLFIVFSFIISLFVLFAKAWQNSTSTRLEAHIAFFTLLITSVYSFFLDKEVKGKPDAYSLVSCAAFAIMSLGLSRLSHLGFELDLLYFFSGILTVQLMKIKLWLVIVGGSFSYSLIILRSNLDALSRSGYLELHVPDHVDIEIASNSHGSGHVASQVDSTQVITGAGNTHLMIIRPQEADATPQNEDLGFSFSQVGSASQEGKSGRDNSIIARFMGCIEALKKEKTNVIHTISKHVDKYLKTNVVVDENYIPVSEIHCDDNLVMDALSPEIINDLRESVRLMVTAGFEEECCTAYCSCRRVFMNEILSIFGLQVQELKRKEIDMMKIKSLNALVRILFPNERRLCDRVFEGSISSMREVYANLTIPLMIIVNALAIWSNSPSPFSGKFLELKKLILTYGDKVQATVPCDGLHPITREVMNYIRDVSINRNSSPRHDLEESTMIDRVGKLSLSVHMAKIMELLERSLKANSKNYNNPSLGYFFIMNNRRFIELEVELYGLGPIIGDDWLRKNRTKFQQNLQLYHRSSWNKIVNILKLDINESPNVETELLKDKLNSFNEHFDEICNVQSTWFVFDEQLREQIIKSIDNILLPAYGSFIKRFQNFLEKQAYEYIKYGIFDVKEHVNNLFLVRE 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01315 679 SUPERFAMILY Cullin repeat-like 302 675 IPR016159 -
Cca05g01315 679 PANTHER EXOCYST COMPLEX PROTEIN EXO70 12 676 IPR004140 GO:0000145|GO:0006887
Cca05g01315 679 Pfam Exo70 exocyst complex subunit 436 671 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca05g01315 679 PANTHER PROTEIN, PUTATIVE-RELATED 12 676 - -
Cca05g01315 679 Gene3D Exocyst complex component Exo70 240 434 - -
Cca05g01315 679 Gene3D Exocyst complex component Exo70 435 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01315 Cca-Chr5 31010060 31012140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01315 295 675 EXO70 exocyst subunit family AT5G58430 41.403 2.82e-83 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01315 - - gmx:100795016 694.886