Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01314 ATGGTGCTGATGCTCATTGAAATCAAGAGTTGGCTGCACAAGCCAAAGGTACGGAAATTTGTTTGTTTTGTTTCATCTATTGTTGGGCTGATCTGTTACGCTTGCAGCTCTTCTTTCAATCGTTTATTTGGAAAGTGGACCCAATGGAAGATATCACTTTACATTGCTTTTAGTTTCTTCATAGTCTACCTTGTCCACCGATTCGCCACCAAAAGTGTGCACTTCAGCTCTCCCCGGCTGAAAGCTCATTCAGCCTTTTTGATTTTGCTTATAACTTCGGTATACTCCTTTTTCGTTGATGAAAAAGTGGGAGGGAAATCAGATGTATATAGCTTACTTTCTTCTGCTGCATTTGCTATCACGTCTTTGGGATTGTCAACTGATTTCCTGTATTTTTTCACTGGACTTCTAATAGTACAACTCATGAAAATCAATTTTTGGTTGGTTATTGTTGGAGGGGGTTTTAGTTATTCCCTCATAATTCTTCGTGCTACTTTGGATCCTCTATTGCCTATATCAAATAGACCTGAAGACCAAGTACCCCTCCTTCCAAGTGATCTCCATTCACCACCACAGGTACCCAGTGGTAGTGTTTCTCCACCAGATTTTCCACAACATACTGATGCCACTCTAGCCACAACCCAAGTTGGTTCAAGTTCACCACAAGGCAATATTATAAATAGAGGTCTCATCAGGACACAGTTCATGGGTCACATAGAGGAGCTTAAGAAGGAAAATGGGAAGGTTATCGACACAATTTTCAAGCATGTGGGTGAATACCTTAAGGCTAATGTTGTAAATGAGGACCAGATTCCGGTGCCGGAAATGCAAGCGGACGACAACTTGGTGGCGGATGCGTTGCCGCAGGGAATCATCACCAAAATTGGTGAAACCGGGAGGATGATGTCACAGAATGAGTGTTACAATGTGTACAGCAGATGCCGGAGCGATTTTTTAAAAGAGTGTCTGTCAGTGTTTGGATTGCAAGTTGAAGAGTTCAAGGCGGAGGAAATTGACAAGATGGAGAAGATTGAGAGTTGGATAAAGGCTTTGAACCTAACCGTGAGGATACTGTTTCCCAATGAAAGGAGACTCTGTGATCTTGTCTTCTCTTCATCTCATGCTGCTGATATCTCTTTCAGCAAAGTTTGCAAGGATTTGACTATTGGCCTACTGAGCTTCGTGAATTCCTTAGCCACTCAGAATCATCATTCGCCCTACCACTTGTCCCATGTCATCCCCAAAGTGTTCAAAACTTTGAGTGGGCTGATTCCAAATTTCAATTCACTGTTTTTTGGTCAGTTGCTGAGTGAATCACTCAGAAATGATGCTGTCCTTGTTGGGAAGAGATTAGGCATTTTTGTTGAGTTGGAGAGTCTTATTCAACGTGAGGTAGCGCAGGAGACTGTTCCTGATGGTGGGATTCATCCAACTACCCACAAAGTGATGGACTATCTCAGAGATGTTTTCACTGACAATGAGAATTTCTCAATTAGAAAGGGTATATCTTCATTTTCAGACCAGGTAGCCAGGATAATACAGGTGTTAGACAGCAATTTGGAAGCTAAGTCCACAAACTACAAAGATCATGCATTGGGCCATGTTTTCATGATAAATAATCTCATGCTTTTACAATATGGGGAACATATATATGGAGTCATTTTTGGTGAAGATTGGTACAGATCAAAGATCAACCAAAACATTGAACTCTATCAAAGAAGCTCATGGAATAAGATCTTGGAATGTTTAATGCCAGACCGCTGTGAGTCGATGGCTCCTAATGTTGTAGAAGGGTCGATGAAAGAGAAGCTCAAATTGTTCAATCAGCACTTCAACGAGATATGCAGAGCTCAGTCTGCATGGTTTATCTTCGATGAGGAACTAAGGGAACAAATGATAAAATCCATAGAGAACACATTGTTGCCGGCATATGGAAACTTTATTGGAAAGTTGCAAGATGTTATTGGTAAGGATGCTTATGACTTTATTGAGTATGGACTGCAGAATATTCAAGATCGACTGAGCCTTTTGTTTCTTGTAAGCAATGCATGA 2052 0.4113 MVLMLIEIKSWLHKPKVRKFVCFVSSIVGLICYACSSSFNRLFGKWTQWKISLYIAFSFFIVYLVHRFATKSVHFSSPRLKAHSAFLILLITSVYSFFVDEKVGGKSDVYSLLSSAAFAITSLGLSTDFLYFFTGLLIVQLMKINFWLVIVGGGFSYSLIILRATLDPLLPISNRPEDQVPLLPSDLHSPPQVPSGSVSPPDFPQHTDATLATTQVGSSSPQGNIINRGLIRTQFMGHIEELKKENGKVIDTIFKHVGEYLKANVVNEDQIPVPEMQADDNLVADALPQGIITKIGETGRMMSQNECYNVYSRCRSDFLKECLSVFGLQVEEFKAEEIDKMEKIESWIKALNLTVRILFPNERRLCDLVFSSSHAADISFSKVCKDLTIGLLSFVNSLATQNHHSPYHLSHVIPKVFKTLSGLIPNFNSLFFGQLLSESLRNDAVLVGKRLGIFVELESLIQREVAQETVPDGGIHPTTHKVMDYLRDVFTDNENFSIRKGISSFSDQVARIIQVLDSNLEAKSTNYKDHALGHVFMINNLMLLQYGEHIYGVIFGEDWYRSKINQNIELYQRSSWNKILECLMPDRCESMAPNVVEGSMKEKLKLFNQHFNEICRAQSAWFIFDEELREQMIKSIENTLLPAYGNFIGKLQDVIGKDAYDFIEYGLQNIQDRLSLLFLVSNA 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01314 683 MobiDBLite consensus disorder prediction 181 223 - -
Cca05g01314 683 Pfam Exo70 exocyst complex subunit 346 674 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca05g01314 683 PANTHER PROTEIN, PUTATIVE-RELATED 9 679 - -
Cca05g01314 683 SUPERFAMILY Cullin repeat-like 254 678 IPR016159 -
Cca05g01314 683 MobiDBLite consensus disorder prediction 199 223 - -
Cca05g01314 683 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 679 IPR004140 GO:0000145|GO:0006887
Cca05g01314 683 Gene3D Exocyst complex component Exo70 233 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01314 Cca-Chr5 31006024 31008339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01314 270 678 EXO70 exocyst subunit family AT5G58430 42.404 1.12e-91 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01314 - - ccaj:109789457 1356.27