Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca05g01313 ATGAATCTTGGGTTCATGCTAATCAAAATTCAGAGTTGGCTGCAGCAGCCAAAGGTATGGAGATTTGTGTGCTTTGTTTCATGTATTGTTGGACTGTGCTGTTATGCCCTCGGCTCCTCTTTCAATGATTTATTCGGCAAGTGGAGTTGGTGGAAGATATTACTTTACATTGTTGTTAGTTCTATTATCTGCCTTGCTGTCTTGTTCACAATGTCATGGCAGGGCTCCACTTCTCTCCCGCTGGAAGCTAATATTGGCTTTTTGGTTTTGATGATCACTTGTGTTTACTCATTTTTCTTTGATAAAGTGGTGAAAGGAAAACCAGATGCATATAGTCTGCTTTCAAGTGCTGCTTTTGCTATCATGTCTGTAAGCTTGTCAAGACTGAGCCACTGTGGATTTGAGGTTGATCTCTTGTATTTTTTCAGTGGGCTTCTAACCATTCAACTCATGAAAATAAAATTGTGGTTAGTTATTGTTGGAGGGAGTTTCAGTTATTCTCTCATCAAACTTCGTTCCACGTTGAATGTTCATGTTTCACTGATACATAGGGATCTTGAACTCCAAGTCGTAGACGAAGACATTGAAAGCGGATTACTACTTTCAGCAAGAAGCAGTGCTTCCCAATCCCAAGCTATTATTTCACAAGCTGATGTCCCTCTAGAAAATGAGGATCTAGCAATCCTACTCACTCAAATCGGTTCAGATTCACAAGACCGTGATATATTTGACTCCAAAAGTTGGAATATAGAGAGAGAATTGGCACAGCAGCCGGAGCAGCTTTTATCTTCTTTTGTCGAGCTTATCTCGAGTGCAAGTTCCATTAAACGTGCTGCAAGATTTCAACCGCTGATTAAGTCTTGCACAGTAATTGAGAAAGAGAGGATCAAAGAAATTCTCATTGCACGATTCATGGCTCGTATAAAGGCACTCAAGAAGAAGAATAGTAGTGTTATCAGCATGATTTCCAAGCACGTAGACACATGCCTTAAAGTTAATATTGTCGATACAGACCTGATTCCCGTGCCACAACGGGATGACAACTTGGTGTTGGATGCGTTGCAGTTTGGAGATGATGACAATACTTTCGACGACCTGCGTGAAACCGCGAAGCTGATGGTGATGGCAGGGTTTCAAGAGGAATGCTGCGCAGCGTACTGTAGTTGGCGGAGGGAGTTTCTGAATGAGACTCTCTCCACATTTGGATTGCAAGTGCAAGACATTCACAAGAAAGACAAAGCTCAGTGTTTGATCAAAGCTTTGATCGTAGCTGTGAGGATACTGTTTCCCTATGAAAGGAGACTCTGCGATCGGGTCTTTGGAATGTCCAACATTTCCTCCGATTTTGCTTTTACAGATGTTTGCACGGAATTAGCTACATCTCTACTAAGTACTGTCGATACCTTGGCAGATTTGATCCCTCATGCATTGGAGGAGCTCATGTATGAATTCGAAACACTGTTTTTTGGTAAGTACAGTAAATCGCTCAAAATTGATGCACGCAAGGTTCGGAAGAGTTTGGGCATTTTAATGGATTCAGAGAATGTTCTTACTTATTGCGGCCACGGGCTTCTTCCGGTTACCCTTCAATTGTCGAACTATATTCGTGATAATTCCATTCAAACAGCAAGTGACCTTAAGCAAGATTCAGATGGAATGCTTTCACCTTCCATGCAATTAGTCATGCTAACAAGGCTGTTCGAGAGGAGTTTGAAAGTTAACTCCAAAAATTGCAATAACCCTACTTCGGGTTATGTTTTCATCCTCAACAATCGAAGCTACATACACCGAGACGCATATATGCATCAACAGACATCTAATTTCTATTTTTGGCTCAGAAAAAACAAAACAAAAATCGAAAAATACCTTCAACTCTATCGGAAGAGCTCATGGACAAAGATTCTGAACATTTTGAAGCTGGACATGGATGAGTCAGAACCTAATGCTGCAGCCGAGTTAATGAAAGATAAGCTTCGTTCCTTCAACGAACACTTTTATGATATATGCAACGATCAGTCTACGTGGTTTGTCCTTGATAAGTTGTTAAGGAAACGGATGATAAATTCCATAGAAAGCATCTTGTTGCCAGCATACGGAAACTTCATTGGGAGGTTGCAGGATTTTCTTGGTAATCATGCTTACGAGTTTATTAAGTATGGAATAATTGACATTCAAGATCGACTCAACAATTTGTTTCTTGTTACGGAGTAG 2211 0.4071 MNLGFMLIKIQSWLQQPKVWRFVCFVSCIVGLCCYALGSSFNDLFGKWSWWKILLYIVVSSIICLAVLFTMSWQGSTSLPLEANIGFLVLMITCVYSFFFDKVVKGKPDAYSLLSSAAFAIMSVSLSRLSHCGFEVDLLYFFSGLLTIQLMKIKLWLVIVGGSFSYSLIKLRSTLNVHVSLIHRDLELQVVDEDIESGLLLSARSSASQSQAIISQADVPLENEDLAILLTQIGSDSQDRDIFDSKSWNIERELAQQPEQLLSSFVELISSASSIKRAARFQPLIKSCTVIEKERIKEILIARFMARIKALKKKNSSVISMISKHVDTCLKVNIVDTDLIPVPQRDDNLVLDALQFGDDDNTFDDLRETAKLMVMAGFQEECCAAYCSWRREFLNETLSTFGLQVQDIHKKDKAQCLIKALIVAVRILFPYERRLCDRVFGMSNISSDFAFTDVCTELATSLLSTVDTLADLIPHALEELMYEFETLFFGKYSKSLKIDARKVRKSLGILMDSENVLTYCGHGLLPVTLQLSNYIRDNSIQTASDLKQDSDGMLSPSMQLVMLTRLFERSLKVNSKNCNNPTSGYVFILNNRSYIHRDAYMHQQTSNFYFWLRKNKTKIEKYLQLYRKSSWTKILNILKLDMDESEPNAAAELMKDKLRSFNEHFYDICNDQSTWFVLDKLLRKRMINSIESILLPAYGNFIGRLQDFLGNHAYEFIKYGIIDIQDRLNNLFLVTE 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca05g01313 736 SUPERFAMILY Cullin repeat-like 359 732 IPR016159 -
Cca05g01313 736 Gene3D Exocyst complex component Exo70 242 736 - -
Cca05g01313 736 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 733 IPR004140 GO:0000145|GO:0006887
Cca05g01313 736 PANTHER PROTEIN, PUTATIVE-RELATED 11 733 - -
Cca05g01313 736 Pfam Exo70 exocyst complex subunit 537 729 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca05g01313 Cca-Chr5 31000140 31002487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca05g01313 340 735 EXO70 exocyst subunit family AT5G58430 36.425 1.89e-73 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca05g01313 - K07195 gmx:102668498 830.091